Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04217 and BL00359

See DNA alignment / Visit BSNT_04217 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:18
# Commandline: needle
#    -asequence pep-align/BSNT_04217___lrgA.1.5803.seq
#    -bsequence pep-align/BL00359___lrgA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04217___lrgA-BL00359___lrgA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04217___lrgA-BL00359___lrgA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04217___lrgA
# 2: BL00359___lrgA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 156
# Identity:      99/156 (63.5%)
# Similarity:   113/156 (72.4%)
# Gaps:          29/156 (18.6%)
# Score: 473.5
# 
#
#=======================================

BSNT_04217___      1 MSAKKVYGFLTQAFIFAVIMLVSNMIAAIVPIPIPASVVGLVLLFLLLCL     50
                     |..||.||||||||||||:|.:||.|||::|||||.||:||||||.|||.
BL00359___lrg      1 MKGKKEYGFLTQAFIFAVMMFISNGIAAVLPIPIPPSVIGLVLLFALLCT     50

BSNT_04217___     51 KVIKLEQVETLGTSLTSLIGFLFVPSGISVMNSLGVMQQYGLQIVLVILL    100
                     ||:||||||:|||:|||||||||||||||||||||||::|||.|||||.|
BL00359___lrg     51 KVLKLEQVESLGTALTSLIGFLFVPSGISVMNSLGVMEKYGLPIVLVIFL    100

BSNT_04217___    101 ATIILLGATGLFSQLILSLSGK----------RKTAADMKTKTVQSPQNN    140
                     ||:|||.|||||||.|||:..|          :|||:             
BL00359___lrg    101 ATVILLAATGLFSQFILSVGKKDRQDTRVEPAKKTAS-------------    137

BSNT_04217___    141 NELVHH    146
                           
BL00359___lrg    137 ------    137


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