Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04248 and BL00395
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:22
# Commandline: needle
# -asequence pep-align/BSNT_04248___phoR.1.5803.seq
# -bsequence pep-align/BL00395___phoR.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04248___phoR-BL00395___phoR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04248___phoR-BL00395___phoR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04248___phoR
# 2: BL00395___phoR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 588
# Identity: 343/588 (58.3%)
# Similarity: 426/588 (72.4%)
# Gaps: 16/588 ( 2.7%)
# Score: 1663.5
#
#
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BSNT_04248___ 1 MNKYRVRLFSVFVVCMILVFCVLGLFLQQLFETSDQRKAEEHIEKEAKYL 50
|.|:|.||.:..:..:||||..||..|..||.:|...|...||||||..:
BL00395___pho 1 MIKFRTRLLAALLTLLILVFASLGFLLVHLFHSSYDAKLSSHIEKEAALV 50
BSNT_04248___ 51 ASLLDAGNLNNQANEKIIKDAGGALDVSASVIDTDGKVLYGSNGRSADSQ 100
|||.:..|:.:.....|::.|...||...|:|||.|:||:...|| |:.|
BL00395___pho 51 ASLANGENMKSSEQGAILEKASRELDSRVSLIDTKGQVLFHFGGR-AEEQ 99
BSNT_04248___ 101 KV--QALVSGHEG-----ILSTTDNKLY-YGLSLRSEGEKTGYVLLSASE 142
.| :||.|...| .::..|..:| |...|:.:|...||:|:|...
BL00395___pho 100 SVIKEALESDLNGEGGGFRINPDDESVYRYVQPLKDDGNVNGYILISTPV 149
BSNT_04248___ 143 KS-DGLKGELWGMLTASLCTAFIVIVYFYSSMTSRYKRSIESATNVATEL 191
.| ..:..::|.:|..||.|||::|....:.:||:|...|||||.||.||
BL00395___pho 150 DSLQDINQKIWILLGVSLGTAFLIIAGLGARITSQYTNPIESATQVAIEL 199
BSNT_04248___ 192 SKGNYDARTYGGYIRRSDKLGHAMNSLAIDLMEMTRTQEMQRDRLLTVIE 241
:||||.|||:. .....|..::|.||.:|.:|||.||||||||.||||
BL00395___pho 200 AKGNYKARTFN---EDETMLSQSINMLAQNLQDMTRAQEMQRDRLQTVIE 246
BSNT_04248___ 242 NIGSGLIMIDGRGFINLVNRSYAKQFHINPNHMLRRLYHDAFEHEEVIQL 291
||.||||:|||:|:|:||||:|.||||:..:.:|...||:..||||:|.|
BL00395___pho 247 NIDSGLILIDGKGYIHLVNRAYQKQFHVEADQLLYHFYHEVLEHEEIINL 296
BSNT_04248___ 292 VEDIFMTETKKCKLLRLPIKIERRYFEVDGVPIMGPDDEWKGIVLVFHDM 341
:|:|||||.|..|:.:|||||||||||||||||:|.:|||||||||||||
BL00395___pho 297 IEEIFMTEAKVRKMFKLPIKIERRYFEVDGVPIIGINDEWKGIVLVFHDM 346
BSNT_04248___ 342 TETKKLEQMRKDFVANVSHELKTPITSIKGFTETLLDGAMEDKEALSEFL 391
||.|:||:||||||||||||||||||||||||||||||||.::|.|.:||
BL00395___pho 347 TERKQLEEMRKDFVANVSHELKTPITSIKGFTETLLDGAMNERETLLQFL 396
BSNT_04248___ 392 SIILKESERLQSLVQDLLDLSKIEQQNFTLSIETFEPAKMLVEIETLLKH 441
|||||||.|||:|:||||||||||||||||:|:.....::|.|||.|||:
BL00395___pho 397 SIILKESSRLQTLIQDLLDLSKIEQQNFTLNIQNCNIGEILAEIEMLLKN 446
BSNT_04248___ 442 KADEKGISLHLNVPKDPQYVSGDPYRLKQVFLNLVNNALTYTPEGGSVAI 491
||:||||:|.|..|..|...||||:||||:||||||||||||||.|||.|
BL00395___pho 447 KAEEKGITLTLEKPDKPAVASGDPHRLKQIFLNLVNNALTYTPEDGSVTI 496
BSNT_04248___ 492 NVKPREKDIQIEVADSGIGIQKEEIPRIFERFYRVDKDRSRNSGGTGLGL 541
:....|..:|::|.|:||||::.|||||||||||:|||||||||||||||
BL00395___pho 497 SADVLEDAVQVKVRDTGIGIKQSEIPRIFERFYRIDKDRSRNSGGTGLGL 546
BSNT_04248___ 542 AIVKHLIEAHEGKIDVTSEPGRGTVFTVTLKRAAEKSA 579
||||||:|||:|:|||.||.|:||.|||.||||:|
BL00395___pho 547 AIVKHLVEAHQGEIDVESERGKGTEFTVRLKRASE--- 581
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