Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04983 and BL00581
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:10
# Commandline: needle
# -asequence pep-align/BSNT_04983___yvgO.1.5803.seq
# -bsequence pep-align/BL00581___yvgO.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04983___yvgO-BL00581___yvgO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04983___yvgO-BL00581___yvgO.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04983___yvgO
# 2: BL00581___yvgO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 179
# Identity: 94/179 (52.5%)
# Similarity: 117/179 (65.4%)
# Gaps: 21/179 (11.7%)
# Score: 450.0
#
#
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BSNT_04983___ 1 MKRIRIPMTLALGAALTIAP-LSFASAEEN------PAPKMSQTTAAG-- 41
||::....| ||...||..| ||.|...:: ..|.||..|:..
BL00581___yvg 1 MKKMFAFFT-ALMLGLTCLPYLSEAKESKHTDSSVTSLPSMSIPTSLNQS 49
BSNT_04983___ 42 ---------TTAADVGLNVNLDVLGIANQIADAIKSAQNRDGFVKNLMES 82
|:|.| |:::||:|||.|.|.|||..:.||.|||||.||:
BL00581___yvg 50 LNEEKQQFKTSAID--LSISLDLLGIGNSIRDAIVQSNNRSGFVKNCMET 97
BSNT_04983___ 83 SFYASGQKYNVMVFNLSQEYEDHLNGVQFYGSAVYDGITYGIWVFEDGTF 132
:||::||:||||||||||.|.:.|.||:|||||.|.|:.|||||||.|.|
BL00581___yvg 98 AFYSAGQRYNVMVFNLSQGYHNGLRGVKFYGSANYHGVIYGIWVFESGQF 147
BSNT_04983___ 133 TNKGDGGWINWAFRGWFDRDGSTVAFHRP 161
||:||||||||||:|||||:|.||.|.:|
BL00581___yvg 148 TNQGDGGWINWAFKGWFDRNGQTVTFRKP 176
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