Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04929 and BL00727

See DNA alignment / Visit BSNT_04929 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:07
# Commandline: needle
#    -asequence pep-align/BSNT_04929.1.5803.seq
#    -bsequence pep-align/BL00727___liaG.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04929-BL00727___liaG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04929-BL00727___liaG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04929
# 2: BL00727___liaG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 294
# Identity:     107/294 (36.4%)
# Similarity:   167/294 (56.8%)
# Gaps:          11/294 ( 3.7%)
# Score: 436.0
# 
#
#=======================================

BSNT_04929         1 MKKMLGKLLITAGILVCFAVVVKDVFAAGLGFINGIEADSA---SASPRD     47
                     |||.:|||||.||||:...::...  ..|..|. |.:.:||   .|...|
BL00727___lia      1 MKKTVGKLLIIAGILILAGMMFNG--REGFSFF-GFDEESARTYHAQAED     47

BSNT_04929        48 IDSMVIESDSKDVRIIAEERSDISAGISGDSGKLFVTENKRKLELTVKEK     97
                     ||.:.|::.|..|.|.||.|.||.|.|||.:.:|..:|..|.|:|:...|
BL00727___lia     48 IDKIDIDAKSITVNIQAENRDDIKAEISGKNVRLDSSEQGRTLQLSAHSK     97

BSNT_04929        98 EF-QFLNGFNRSTLIVRLPYDYKGDLAVRTSSGDLSVAGNDHLALSGLNA    146
                     .| .|.  :.::.|||::|.:||.||::.:.||::.::|.. |.|..:..
BL00727___lia     98 GFWPFF--WKKNELIVKIPSEYKDDLSISSGSGNVKLSGGG-LHLRNVAL    144

BSNT_04929       147 VSASGNTSVTDVRLQDLKVKASSGDVSISNTVSKTAGIDLASGDANLVHV    196
                     .|.||:....|::.:||.||.:||.|.:.|..:..|.|...||:..|.:|
BL00727___lia    145 KSGSGSLKADDLQAEDLSVKGTSGSVRLENVQTAAADIRSTSGNTKLENV    194

BSNT_04929       197 SGSLDVKMTSGDFNAVLKKVTGPVSVTLTSGDANVSLPQNGCFAVNALSA    246
                     :|.|.:|.|||:..|...::...:|:..|||:..:|||.:...::.|.|.
BL00727___lia    195 TGKLSIKQTSGNLRASFTEINDSLSIKQTSGNTKLSLPDDADISLEAEST    244

BSNT_04929       247 SGYVSSPYSFADKAHKEQHHITGTQGSGRHPIDIKTDSGDLAIR    290
                     ||.:|..||| |:...|:..:||.:|:|::.|||...||:::|.
BL00727___lia    245 SGNISHSYSF-DQVANEKRTLTGKKGNGKNKIDISITSGNVSIE    287


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