Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04926 and BL00729

See DNA alignment / Visit BSNT_04926 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:07
# Commandline: needle
#    -asequence pep-align/BSNT_04926___yvqE.1.5803.seq
#    -bsequence pep-align/BL00729___liaS.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04926___yvqE-BL00729___liaS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04926___yvqE-BL00729___liaS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04926___yvqE
# 2: BL00729___liaS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 362
# Identity:     260/362 (71.8%)
# Similarity:   306/362 (84.5%)
# Gaps:          10/362 ( 2.8%)
# Score: 1330.0
# 
#
#=======================================

BSNT_04926___      1 MRKKMLASLQWRAIRMTTGISLLLFACLISFMMFYYRLDPLVLLSSSWFG     50
                     ||...||::||||:|::.|:|..:|..::.||:|||:|||.||:.|.|||
BL00729___lia      1 MRTNRLANIQWRAVRLSLGVSFTIFLAVLGFMLFYYQLDPRVLIVSRWFG     50

BSNT_04926___     51 IPFILILLLISVTVGFASGYMYGNRLKTRIDTLIESILTFENGNFAYRIP    100
                     ||||.:|.|||..|||.||||:||:||.|::.||||||.:||||||||||
BL00729___lia     51 IPFIALLALISTAVGFGSGYMFGNQLKKRLEKLIESILKYENGNFAYRIP    100

BSNT_04926___    101 PLGDDEIGLAADQLNEMAKRVELQVASLQKLSNERAEWQAQMKKSVISEE    150
                     .|||||||||||||||||:|:|.||||||||||||||||.||||||||||
BL00729___lia    101 SLGDDEIGLAADQLNEMAERIERQVASLQKLSNERAEWQDQMKKSVISEE    150

BSNT_04926___    151 RQRLARDLHDAVSQQLFAISMMTSAVLEHV-KDADDKTVKRIRMVEHMAG    199
                     ||||||:|||||||||||||||||||||.: ..||:|..:|::|||.||.
BL00729___lia    151 RQRLARELHDAVSQQLFAISMMTSAVLEGIDAAADEKLAQRLKMVEKMAA    200

BSNT_04926___    200 EAQNEMRALLLHLRPVTLEGKGLKEGLTELLDEFRKKQPIDIEWDIQDTA    249
                     :||||||||||||||||||||||:|||.:||.||:.||.|||:|:|:|..
BL00729___lia    201 DAQNEMRALLLHLRPVTLEGKGLQEGLADLLKEFKAKQSIDIDWEIEDAG    250

BSNT_04926___    250 -ISKGVEDHLFRIVQEALSNVFRHSKASKVTVILGIKNSQLRLKVIDNGK    298
                      :.||||||||||||||||||||||||:||||.|.::|.||:|||||||:
BL00729___lia    251 KLPKGVEDHLFRIVQEALSNVFRHSKATKVTVRLLLRNKQLQLKVIDNGE    300

BSNT_04926___    299 GFKMDQVKASSYGLNSMKERASEIGGVAEVISVEGKGTQIEVKVPIFPEE    348
                     |||||.||.|||||||:||||||:|||||:||..|||||::||||||.::
BL00729___lia    301 GFKMDAVKTSSYGLNSIKERASEVGGVAEIISFTGKGTQVDVKVPIFEQQ    350

BSNT_04926___    349 KGENERDSSIID    360
                     |||.        
BL00729___lia    351 KGEA--------    354


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