Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_01030 and BL00841

See DNA alignment / Visit BSNT_01030 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:32
# Commandline: needle
#    -asequence pep-align/BSNT_01030___thiL.1.5803.seq
#    -bsequence pep-align/BL00841___thiL.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01030___thiL-BL00841___thiL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01030___thiL-BL00841___thiL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01030___thiL
# 2: BL00841___thiL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 328
# Identity:     201/328 (61.3%)
# Similarity:   255/328 (77.7%)
# Gaps:           4/328 ( 1.2%)
# Score: 1066.0
# 
#
#=======================================

BSNT_01030___      1 MDEFDLIHSITPRTIHHSSVDVGIGDDAALYTAKHGVQEIVCVDTMVEDV     50
                     ||||:||..||||::.|..:::|||||||:|..|:..||||.|||||:.:
BL00841___thi      1 MDEFELIQRITPRSLSHREIEIGIGDDAAVYHTKNNYQEIVAVDTMVDGI     50

BSNT_01030___     51 HFKLHYSSPEDIGYKALAVNISDIAAMGGIPKFYLVSLAVPSKWTASEIK    100
                     ||...:|||.|||||||||||||||||||.||:||||:||||.|.|::|:
BL00841___thi     51 HFLSSHSSPADIGYKALAVNISDIAAMGGRPKYYLVSIAVPSGWGATDIE    100

BSNT_01030___    101 AMYEGMNELAKLYQMDLIGGDTVSTADKLVVTVTVIGEVEKGRACLRSLA    150
                     ||||.||:||.||:||||||||||....||:|||.|||:||||:||||.|
BL00841___thi    101 AMYEEMNKLATLYEMDLIGGDTVSANGPLVLTVTAIGEIEKGRSCLRSHA    150

BSNT_01030___    151 RPNDVVFVTGEIGSSAAGLSLLLEETNPQNSSVETDYFIHRHKRPEPRVS    200
                     .|.||||||||:||||||||.:|.:|:.::.: ::.|||.|||||||||.
BL00841___thi    151 EPGDVVFVTGELGSSAAGLSFILGQTSARDET-QSQYFIERHKRPEPRVE    199

BSNT_01030___    201 VGRLCSIFKRAALNDVSDGLASELNEIAEASCVSIEIDESMLPIHSDLPK    250
                     .|.:||.:...||||:|||||||||||||||.|||:|.:.::|:||||..
BL00841___thi    200 AGLICSRYHHVALNDISDGLASELNEIAEASRVSIDIYKELIPVHSDLHI    249

BSNT_01030___    251 LHPNWKEWALFGGEDFELTGTVSKEEWEVLKQQCAARQLPITKIGHVREK    300
                     ||..|:||.|||||||||.||:|.::||...|:|:...:.:.:||.|.::
BL00841___thi    250 LHTKWEEWVLFGGEDFELVGTISNDQWERFSQECSEHDVRVHQIGRVTKQ    299

BSNT_01030___    301 TKSKVILKTDQTSMILEKKGYNHFK---    325
                     .:::|.....|..::||||||||||   
BL00841___thi    300 GQAEVFYHDGQDRVLLEKKGYNHFKQDR    327


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.