Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_01031 and BL00842

See DNA alignment / Visit BSNT_01031 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:32
# Commandline: needle
#    -asequence pep-align/BSNT_01031___ydiB.1.5803.seq
#    -bsequence pep-align/BL00842___ydiB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01031___ydiB-BL00842___ydiB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01031___ydiB-BL00842___ydiB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01031___ydiB
# 2: BL00842___ydiB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 158
# Identity:     119/158 (75.3%)
# Similarity:   140/158 (88.6%)
# Gaps:           0/158 ( 0.0%)
# Score: 659.0
# 
#
#=======================================

BSNT_01031___      1 MKQLKWRTVNPEETKAIAKLAAAFAKPGDVLTLEGDLGAGKTTFTKGFAE     50
                     ||.|:|:|..|||||.||:|||.:.:||||:|||||||||||||||||||
BL00842___ydi      1 MKTLEWKTTEPEETKNIARLAAKYVQPGDVITLEGDLGAGKTTFTKGFAE     50

BSNT_01031___     51 GLGITRIVNSPTFTIIKEYNDGVLPLYHMDVYRMEDESEDLGLDEYFHGQ    100
                     |:||.|:|:||||||||||.||.|||:||||||||||:|||||||||.|.
BL00842___ydi     51 GIGIKRVVSSPTFTIIKEYRDGSLPLFHMDVYRMEDETEDLGLDEYFEGD    100

BSNT_01031___    101 GVCLVEWAHLIEEQLPQERLQIVIKRAGDDEREITFTAVGNRYEMLCEEL    150
                     ||||||||||||||||:|||::||||.|||:|::|||..|.|||.||||:
BL00842___ydi    101 GVCLVEWAHLIEEQLPKERLEVVIKRLGDDKRKLTFTPKGRRYENLCEEI    150

BSNT_01031___    151 SRHDNISN    158
                     |:||:..:
BL00842___ydi    151 SKHDDTCD    158


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.