Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00126 and BL00855

See DNA alignment / Visit BSNT_00126 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:48
# Commandline: needle
#    -asequence pep-align/BSNT_00126___yacD.1.5803.seq
#    -bsequence pep-align/BL00855___yacD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00126___yacD-BL00855___yacD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00126___yacD-BL00855___yacD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00126___yacD
# 2: BL00855___yacD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 298
# Identity:     206/298 (69.1%)
# Similarity:   254/298 (85.2%)
# Gaps:           3/298 ( 1.0%)
# Score: 1101.0
# 
#
#=======================================

BSNT_00126___      1 MKSRTIWTIILGALLVCCIAVAYTLTKSQTGASSSG-ESIATIGGKSVTR     49
                     |||||:|.|||||:.|.||.:||.|||:||.:|||. |.||.||...:||
BL00855___yac      1 MKSRTLWPIILGAIFVNCIVIAYVLTKAQTASSSSAQEVIAHIGKNGITR     50

BSNT_00126___     50 EEWLKEMEDQYGKSTLEDMINVRVVEQLAKKNNLKISKSEVDREFLLIKA     99
                     ||||.|||::|||||||||||.|||.|:|:||.:|:|..:::||||||||
BL00855___yac     51 EEWLSEMEERYGKSTLEDMINDRVVTQMAEKNKIKVSDDDIEREFLLIKA    100

BSNT_00126___    100 VNNSFYEDEHTTEKEWKDQIRYNILLEELLTRDIDISNKELESFYNKNKE    149
                     |.|||||||:|||||||:||::|||||||||:||.||:.||:|||||||:
BL00855___yac    101 VYNSFYEDENTTEKEWKEQIKHNILLEELLTKDIVISDSELKSFYNKNKD    150

BSNT_00126___    150 LYQFDDSYRIRHIVVKDEEEAREVLKELKGGSSFEAVAAERSTDRYTSPY    199
                     ||:||||||::||||||::||.:||||||.||||||.|||.||||||:||
BL00855___yac    151 LYKFDDSYRLKHIVVKDKDEAEQVLKELKEGSSFEAAAAEHSTDRYTAPY    200

BSNT_00126___    200 GGDLGFVTEASDNIPSAYIEEAKTLKEDEWSQEPIKVNNGYAIIQLKEKL    249
                     |||||||.:..:|:|:.|:|:|:.|||::|..||||.:.|||||||||||
BL00855___yac    201 GGDLGFVNDQHENVPAEYLEKAEQLKENQWVDEPIKTSQGYAIIQLKEKL    250

BSNT_00126___    250 KARTFSFDEVKDQIRRQIAMDQLGDKATVKTLWKEADVSWFYGEKSTK    297
                     ..:.|::.|||:|||||||||||||||:||||||:|.:||||.:|.  
BL00855___yac    251 PGQAFTYSEVKNQIRRQIAMDQLGDKASVKTLWKDAKLSWFYDDKK--    296


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