Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05915 and BL00942

See DNA alignment / Visit BSNT_05915 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:00
# Commandline: needle
#    -asequence pep-align/BSNT_05915___yxlF.1.5803.seq
#    -bsequence pep-align/BL00942___yxlF.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05915___yxlF-BL00942___yxlF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05915___yxlF-BL00942___yxlF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05915___yxlF
# 2: BL00942___yxlF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 295
# Identity:     172/295 (58.3%)
# Similarity:   222/295 (75.3%)
# Gaps:           0/295 ( 0.0%)
# Score: 911.0
# 
#
#=======================================

BSNT_05915___      1 MLSIESLCKSYRHHEAVKNVSFHVNENECVALLGPNGAGKTTTLQMLAGL     50
                     |||:..|.|.|:.|:||:||||.:...:|||||||||||||||||||:||
BL00942___yxl      1 MLSVNGLTKMYQQHQAVQNVSFDLEYQQCVALLGPNGAGKTTTLQMLSGL     50

BSNT_05915___     51 LSPTSGTIKLLGEKKLDRRLIGYLPQYPAFYSWMTANEFLTFAGRLSGLS    100
                     |:||||.|:.||.:.::|..||||||:|||:|||||.|:..||.|||.:.
BL00942___yxl     51 LAPTSGRIRFLGRESINRLEIGYLPQHPAFFSWMTALEYTVFAARLSKMK    100

BSNT_05915___    101 KRKCQEEIGEMLEFVGLHEAAHKRIGGYSGGMKQRLGLAQALLHKPQFLI    150
                     :|:..|:....|.:|||.:...::|||:||||||||||||||:|:.:.||
BL00942___yxl    101 RREALEKSRTALRYVGLEKEEDRKIGGFSGGMKQRLGLAQALVHEQRLLI    150

BSNT_05915___    151 LDEPVSALDPTGRFEVLDIMRELKKHMAVLFSTHVLHDAEQVCDQVVIMK    200
                     ||||||||||.||.||||:|::|||.|.:|||||||||||:|||||:::|
BL00942___yxl    151 LDEPVSALDPAGRREVLDMMKDLKKKMTILFSTHVLHDAEEVCDQVIMLK    200

BSNT_05915___    201 NGEISWKGELQELKQQQQTNVFTLSVKEKLEGWLEEKPYVSAIVYKNPSQ    250
                     .|.:.|.|.|..||.:.....:.|:.:|.||||||..||||.:||..|||
BL00942___yxl    201 EGAVKWSGPLHRLKNRHLKPSYMLTAEESLEGWLEHLPYVSKVVYHKPSQ    250

BSNT_05915___    251 AVFELPDIHAGRSLLSDCIRKGLTVTRFEQKTESLEDVYLKVVHA    295
                     |.|.|.|....|.||::|:.:.:::.||||||.||||:||||:..
BL00942___yxl    251 AEFYLTDRSDSRRLLAECLNRQVSIVRFEQKTMSLEDMYLKVMGL    295


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