Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00248 and BL01025
See
DNA alignment /
Visit
BSNT_00248 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:56
# Commandline: needle
# -asequence pep-align/BSNT_00248___rpoA.1.5803.seq
# -bsequence pep-align/BL01025___rpoA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00248___rpoA-BL01025___rpoA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00248___rpoA-BL01025___rpoA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00248___rpoA
# 2: BL01025___rpoA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 314
# Identity: 306/314 (97.5%)
# Similarity: 312/314 (99.4%)
# Gaps: 0/314 ( 0.0%)
# Score: 1540.0
#
#
#=======================================
BSNT_00248___ 1 MIEIEKPKIETVEISDDAKFGKFVVEPLERGYGTTLGNSLRRILLSSLPG 50
|||||||||||||||||||:||||||||||||||||||||||||||||||
BL01025___rpo 1 MIEIEKPKIETVEISDDAKYGKFVVEPLERGYGTTLGNSLRRILLSSLPG 50
BSNT_00248___ 51 AAVTSIQIDGVLHEFSTIEGVVEDVTTIILHIKKLALKIYSDEEKTLEID 100
||||||||||||||||||||||||||||||:||||||||||:||||||||
BL01025___rpo 51 AAVTSIQIDGVLHEFSTIEGVVEDVTTIILNIKKLALKIYSEEEKTLEID 100
BSNT_00248___ 101 VQGEGTVTAADITHDSDVEILNPDLHIATLGENASFRVRLTAQRGRGYTP 150
|||||.|||||||||||||||||||||||||:||||||||||||||||||
BL01025___rpo 101 VQGEGVVTAADITHDSDVEILNPDLHIATLGQNASFRVRLTAQRGRGYTP 150
BSNT_00248___ 151 ADANKRDDQPIGVIPIDSIYTPVSRVSYQVENTRVGQVANYDKLTLDVWT 200
|||||||||||||||||||:|||||||||||||||||:.|||||||||||
BL01025___rpo 151 ADANKRDDQPIGVIPIDSIFTPVSRVSYQVENTRVGQITNYDKLTLDVWT 200
BSNT_00248___ 201 DGSTGPKEAIALGSKILTEHLNIFVGLTDEAQHAEIMVEKEEDQKEKVLE 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BL01025___rpo 201 DGSTGPKEAIALGSKILTEHLNIFVGLTDEAQHAEIMVEKEEDQKEKVLE 250
BSNT_00248___ 251 MTIEELDLSVRSYNCLKRAGINTVQELANKTEEDMMKVRNLGRKSLEEVK 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BL01025___rpo 251 MTIEELDLSVRSYNCLKRAGINTVQELANKTEEDMMKVRNLGRKSLEEVK 300
BSNT_00248___ 301 AKLEELGLGLRKDD 314
||||||||||||||
BL01025___rpo 301 AKLEELGLGLRKDD 314
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.