Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05355 and BL01065

See DNA alignment / Visit BSNT_05355 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:28
# Commandline: needle
#    -asequence pep-align/BSNT_05355___yvkC.1.5803.seq
#    -bsequence pep-align/BL01065.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05355___yvkC-BL01065.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05355___yvkC-BL01065.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05355___yvkC
# 2: BL01065
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 936
# Identity:     257/936 (27.5%)
# Similarity:   423/936 (45.2%)
# Gaps:         168/936 (17.9%)
# Score: 810.0
# 
#
#=======================================

BSNT_05355___      1 --MYSVLFRQAEESS-QLAGAKGMNLIKLTK-HGLPVPDGFIIQTNALAR     46
                       .|.:.|.:.:.:. .|.|.||:||.:|:| .|:.||.||.|.|.|..:
BL01065            1 MGHYVLGFHEIDRTDLPLIGGKGLNLGELSKMDGIQVPPGFCITTKAYEK     50

BSNT_05355___     47 FMEDN-------------------QLQETSENVESGIISGTFSDELKDEL     77
                     .:.:|                   |:.:.:..:.:||.....::|:|:.:
BL01065           51 MIGENDKVSEQIDQLSLLKVKDRKQINDLALQIRNGIERAEIAEEIKEAV    100

BSNT_05355___     78 TSSFYKL-RESYRSVAVRSSSASEDLEGASFAGQYETYLNIKTEEEFLAK    126
                     .|:.... .::|   |||||:.:|||..||||||.:||||||..|..|..
BL01065          101 KSAHSNAGGDAY---AVRSSATAEDLPHASFAGQQDTYLNIKGIEAILKH    147

BSNT_05355___    127 VKECWASFFSGRVSSYKKKMNNQIAEPLMGIVVQGLIDSEMSGVIFSRNP    176
                     :.:||||.|:.|...|:.:......:..:.:|||.::..:.||::|:.:|
BL01065          148 ISKCWASLFTERAVIYRIQNGFDHRKVQLSVVVQQMVFPDASGILFTADP    197

BSNT_05355___    177 VTHDDRELLISASYGLGEAVVSGSVTPDTFIVNKSSFEIQKEIGAKEIYM    226
                     :|.:.:...|.||:.||||:|||:|:.|.:.|.:.:. |||.|..|:..:
BL01065          198 ITSNRKVTSIDASFALGEALVSGTVSADNYKVREGAI-IQKTISEKKTAV    246

BSNT_05355___    227 ESAAEGIAE-KETSEDMRSRFCLTDEQVIELAEITKKTEDLYGYPVDIEF    275
                     .|...|..| :|.....|....|||||:|.|.::.::.|..:|:|.|||:
BL01065          247 YSLESGGTEAREVEAGCRKEQTLTDEQIIRLEKLGRRIEAHFGFPQDIEW    296

BSNT_05355___    276 GIADHQIYLLQARPITTIDQDKKAAEEK-RSFMITDTDMNDFWLNMESNI    324
                     .:||.:.:.:|:|||||:....|.:::| |.:|.         :..:..:
BL01065          297 CLADGEFFFVQSRPITTLFPLPKQSDDKLRVYMS---------VGHQQMM    337

BSNT_05355___    325 EGPVSPLFSSFIVPALEYGLKKSMQKFPIGVVVDEVKLYRGHIYSKNQGG    374
                     ..|::||..||.....:|.|..:..:..|.:..|........:.....|.
BL01065          338 TEPINPLGISFFGLISDYELTCAGGRLFIDLSHDLASFAGRKVVLSTAGK    387

BSNT_05355___    375 QQPPSEDC----------------GKELFPILSEHMYDIINHTYLPFYR-    407
                     ..|.....                ||.:|.:.:|.:...:....|..|| 
BL01065          388 NDPFMHSALVNFLKRKELVKTLPKGKRMFRLGAEGLSWSLPGDALKIYRK    437

BSNT_05355___    408 -TLDQLAQTEHTAESAL-DAFQKLKAFYLTAYEEHFNIVFPQILLTNKLQ    455
                      ..|.:.:....||::: :|.|:||    .|..|   .:|.||   .:.|
BL01065          438 NDTDVVKRLMSKAEASIQEAEQRLK----NASGE---TLFAQI---EEDQ    477

BSNT_05355___    456 AMYQDIQGESEN-----AHFYEM--LTGKMNKSLETDRCLWLFSMEVQEN    498
                     ...:.:..:||:     ...|.:  |..||.|.|.........|..|..|
BL01065          478 KSLKKVLYDSESMAVIMVGLYAVYWLNRKMEKWLGEKNVADTLSQSVLYN    527

BSNT_05355___    499 PN------LLTI---------------FENNKPEQLQEKLEQTDEGRHFL    527
                     ..      ||.:               :.||  |...|.|:|.|.|..|:
BL01065          528 VTSEMGLALLDVSDAARGYPEVQKYLAYANN--ETFFEDLKQLDGGPAFI    575

BSNT_05355___    528 KNVHEFLQEYGWRSVKSHDLIEQIWVENPY----FALANIQNY---VRNG    570
                     ..:..||::||.|.....|:.:..|.|.|.    ..|:||:|:   .|..
BL01065          576 GALRAFLEKYGMRCTGEIDITKTRWSERPSILAPIILSNIKNFEPGARTA    625

BSNT_05355___    571 YHFDNEFQKTKEKREKLYNEFLENIE------DPGLRT------------    602
                          :|::.:.:.||...:.|..::      ....||            
BL01065          626 -----KFEQGRLEAEKKERDLLSRLQQLKGGRQKAKRTKKMISVLRNFIG    670

BSNT_05355___    603 --EFDRYYQWTLNSANIKDDHHFYIDAMLDAKARIFLLKIGELLAENGVI    650
                       |:.:|       |.|| .:..|.:|         |:|...:|.:..:|
BL01065          671 YREYPKY-------ALIK-RYFIYKEA---------LMKEAAVLQQKKLI    703

BSNT_05355___    651 QDREDLWFLYDDEVEQALLHPVSLQEKAEKRRQIFHEYELAQAPAYLGTP    700
                     |.:||:::|..||:::|:.......:|.|:|:..:..||..       ||
BL01065          704 QAKEDIYYLSFDELKEAVCTNRLDVKKIEERKAEYRHYEKL-------TP    746

BSNT_05355___    701 TKEQLKAAEEIVGAVIEDEKNTENHI-----FGIAASSGIATGPVKIIRD    745
                     .:......|.|.|..:.|      ||     .|:..||||..|..::|..
BL01065          747 PRIMTSEGEVITGEALGD------HIPAGALAGVPVSSGIIEGRARVILK    790

BSNT_05355___    746 ANEFSQFAPGDVLVCKMTTPLWTSLFQDAKAIITDTGGILSHAAIIAREY    795
                     ..| :....||:||...|.|.||.||...|.::|:.||:::|.|:|||||
BL01065          791 LEE-ADIEEGDILVTPFTDPSWTPLFVSIKGLVTEVGGLMTHGAVIAREY    839

BSNT_05355___    796 GIPAVLGTRTATERLRDGDIITVDGSSGKITVVSRS    831
                     |:|||:|...||:.::||..|.::||.|.:.::.  
BL01065          840 GLPAVVGVEHATKEIKDGQKIRINGSEGYVEILE--    873


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_05355 and BL01065

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
