Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04039 and BL01150

See DNA alignment / Visit BSNT_04039 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:05
# Commandline: needle
#    -asequence pep-align/BSNT_04039___yrbC.1.5803.seq
#    -bsequence pep-align/BL01150___yrbC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04039___yrbC-BL01150___yrbC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04039___yrbC-BL01150___yrbC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04039___yrbC
# 2: BL01150___yrbC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 261
# Identity:     174/261 (66.7%)
# Similarity:   214/261 (82.0%)
# Gaps:          22/261 ( 8.4%)
# Score: 946.0
# 
#
#=======================================

BSNT_04039___      1 MHQRTIPIKVYIENVKEGENMAGHSKWKNIQKRKNAQDAKRGKIFMKLAK     50
                                         |||||||||||:||||||||||||||||||
BL01150___yrb      1 --------------------MAGHSKWKNIQRRKNAQDAKRGKIFMKLAK     30

BSNT_04039___     51 EIYVAAKEGGADPEANSALRLVIEKAKGANMPNENIDRAIKKAAGGQDGS    100
                     ||||||||||.|||:|::|||||:|||.|||||:|||||||||:|.|||.
BL01150___yrb     31 EIYVAAKEGGPDPESNASLRLVIDKAKNANMPNDNIDRAIKKASGSQDGK     80

BSNT_04039___    101 SYEEITYEGYGPSGIAVMVECVTDNKNRTASNVRTAFNKNGGSLGESGCV    150
                     ||||||||||||||:||||:|:||||||||::|||||:||||||||:|||
BL01150___yrb     81 SYEEITYEGYGPSGVAVMVKCLTDNKNRTATSVRTAFSKNGGSLGETGCV    130

BSNT_04039___    151 AFLFERKGFITIDRTERQIEEDELMLDVLEAGGEELRIEENLYEVFTEPE    200
                     :::|:|||:|.|:|.:.:|:|:|.||:|::||.|||...|.|:|::||||
BL01150___yrb    131 SYMFDRKGYIAIEREDLEIDEEEFMLEVIDAGAEELETSEELFEIYTEPE    180

BSNT_04039___    201 HFEEVKTALESK-YLISSAEVTMLPNTYAEADDQAVEKLETLIDVLEDDD    249
                     .|||||.:||.: |.::::|:||:|.||||.|:...||:|.|||||||||
BL01150___yrb    181 QFEEVKKSLEERGYKLATSEITMVPQTYAEVDEALQEKVEKLIDVLEDDD    230

BSNT_04039___    250 DVQEVYTNYRS    260
                     ||||||||.. 
BL01150___yrb    231 DVQEVYTNVH-    240


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