Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03130 and BL01303

See DNA alignment / Visit BSNT_03130 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:48
# Commandline: needle
#    -asequence pep-align/BSNT_03130___yocH.1.5803.seq
#    -bsequence pep-align/BL01303.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03130___yocH-BL01303.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03130___yocH-BL01303.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03130___yocH
# 2: BL01303
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 288
# Identity:     193/288 (67.0%)
# Similarity:   220/288 (76.4%)
# Gaps:          21/288 ( 7.3%)
# Score: 925.5
# 
#
#=======================================

BSNT_03130___      1 MKKTIMSFVAVAALSTTAFGAHASAKEITVQKGDTLWGISQKNGVNLKDL     50
                     ||||.||||||||||:|||||.|||||:||||||||||||||.||||:||
BL01303            1 MKKTFMSFVAVAALSSTAFGASASAKEVTVQKGDTLWGISQKQGVNLQDL     50

BSNT_03130___     51 KEWNKLTSDKIIAGEKLTISSEETTTTGQYTIKAGDTLSKIAQKFGTTVN    100
                     ||||:|:||.||.|:||.:|.::|....|||||.||||.|||||||.:||
BL01303           51 KEWNQLSSDLIIPGQKLNVSEKQTEEKKQYTIKKGDTLWKIAQKFGVSVN    100

BSNT_03130___    101 NLKVWNNLSSDMIYAGSTLSVKGQATAANTATENAQTNAPQAAPKQEAVQ    150
                     :||.|||:.||:||..::::|.||||        .|..|.|.|..:.|||
BL01303          101 DLKNWNNIKSDIIYPNTSITVDGQAT--------VQAAAAQPAETKPAVQ    142

BSNT_03130___    151 KEQPKQEAV-QQQPKQETKAEAETSVNTEEKAVQSNTNNQEASKELTVTA    199
                     ||...::|. ...||||           :|.|.:||. :|..:|||||||
BL01303          143 KEAKVEKAAPAPAPKQE-----------KEPASRSNV-SQSTAKELTVTA    180

BSNT_03130___    200 TAYTANDGGISGVTATGIDLNKNPNAKVIAVDPNVIPLGSKVYVEGYGEA    249
                     |||||||||::|||||||||..|.||||||||||||||||||||||||||
BL01303          181 TAYTANDGGMTGVTATGIDLKANKNAKVIAVDPNVIPLGSKVYVEGYGEA    230

BSNT_03130___    250 TAGDTGGAIKGNKIDVFVPSKSDASNWGVKTVNVKILN    287
                     ||.|||||||||||||||||||.|.|||||||.||:|.
BL01303          231 TAADTGGAIKGNKIDVFVPSKSAAKNWGVKTVKVKVLK    268


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.