Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04501 and BL01417

See DNA alignment / Visit BSNT_04501 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:42
# Commandline: needle
#    -asequence pep-align/BSNT_04501___glgD.1.5803.seq
#    -bsequence pep-align/BL01417___glgD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04501___glgD-BL01417___glgD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04501___glgD-BL01417___glgD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04501___glgD
# 2: BL01417___glgD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 343
# Identity:     209/343 (60.9%)
# Similarity:   265/343 (77.3%)
# Gaps:           1/343 ( 0.3%)
# Score: 1128.0
# 
#
#=======================================

BSNT_04501___      1 MFNNQMLGVIDETTYKHSLQDLTAQRSLGAIPFAGRYRLIDFMLSNMVNA     50
                      .||||||:||....:||||||||.||:||:|||||||||||.||.||:|
BL01417___glg      1 -MNNQMLGIIDAAVNQHSLQDLTAGRSIGAVPFAGRYRLIDFALSGMVHA     49

BSNT_04501___     51 DIRSVAIFPKYRYRSLMDHLGAGKEWDLHRKKDGLFFFPSPHLHHEYDEF    100
                     .|||||:|.|..|||||||||:||||||:||::||||.||...|.|:...
BL01417___glg     50 GIRSVAVFSKSPYRSLMDHLGSGKEWDLNRKREGLFFLPSSLPHDEHVGL     99

BSNT_04501___    101 GSFRQFSDHLDYFHRSTQQYAVISNSHTVCNIQFQYVLKRHQEVGCDVTE    150
                     ||||||::|||||.||||||||::||:||.:|.||.|||:|.|.|||:||
BL01417___glg    100 GSFRQFAEHLDYFQRSTQQYAVVANSYTVGHIPFQEVLKQHLESGCDLTE    149

BSNT_04501___    151 VFQDGQSLQIYIMSTTLLKDLIYGHSEKGYKTIQEAVEKESSALTICPYE    200
                     :..:|:.|.:|:...:||.:::.||..:|.::.:|...||..:|::..||
BL01417___glg    150 ICHEGKPLGMYVTKKSLLWEMVEGHCPEGAQSFEEVCRKERGSLSVNSYE    199

BSNT_04501___    201 YSGYAAVIDSVEKYYTHSMELIQPRFWQQVFLPQQPIYTKVKDEPPTKYG    250
                     :|||.|||||.|.|..||:.||||.||:|||...||:|||:|::||.||.
BL01417___glg    200 HSGYTAVIDSPESYLFHSLNLIQPVFWEQVFHMGQPVYTKIKNDPPVKYA    249

BSNT_04501___    251 KHSTVKNSLVANGCVLEGEVENCILFRAVHVGKGTKLKNCIIMQKTQIGE    300
                     |:|.||.|::|||||:||||||.:|||.|||||||.:||.::||||:|||
BL01417___glg    250 KNSRVKQSIIANGCVIEGEVENSVLFRGVHVGKGTTIKNSVVMQKTRIGE    299

BSNT_04501___    301 DCLLEQVISDKDVKIGKATEAAGTAEQPLVLRKGLVQGELMNS    343
                     :|.||.||.|||||||...|.:||...|.:|:||.:||.||||
BL01417___glg    300 NCRLEHVICDKDVKIGHHIEMSGTMSLPFILKKGAIQGALMNS    342


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