Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00547 and BL01813
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:10
# Commandline: needle
# -asequence pep-align/BSNT_00547.1.5803.seq
# -bsequence pep-align/BL01813___ycgH.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00547-BL01813___ycgH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00547-BL01813___ycgH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00547
# 2: BL01813___ycgH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 452
# Identity: 108/452 (23.9%)
# Similarity: 129/452 (28.5%)
# Gaps: 293/452 (64.8%)
# Score: 531.5
#
#
#=======================================
BSNT_00547 0 -------------------------------------------------- 0
BL01813___ycg 1 MKRQAKKGDLKWWQLSMIGVGCTIGTGFFLGSSIAIKKSGFSVLAAFLLA 50
BSNT_00547 0 -------------------------------------------------- 0
BL01813___ycg 51 ALGTFLVFQQLAKLTADHPVEGSFCSYAREAFGNWAGFSNGWVYWSSEML 100
BSNT_00547 0 -------------------------------------------------- 0
BL01813___ycg 101 IIGSQLTAISLFTRHWFNEIPLWVFASIYAILGLIVIFTGRSSFEKTENI 150
BSNT_00547 0 -------------------------------------------------- 0
BL01813___ycg 151 LAVLKTAAILMFIIIAVLALCGLLPGKTPEVQFPDRVHELFPFGFMGLWT 200
BSNT_00547 1 ----------------------------------MLATLAIIYIISIGLA 16
||.|||::|::|||||
BL01813___ycg 201 GLIYTFYAYGGIEVMGLMAIHLKDPKDSSKSGSLMLITLAVVYVVSIGLA 250
BSNT_00547 17 LLLVPLHAFTEQDSPFITSLKGYNLEIILDIFNGIFIIAGFSTLVASLFA 66
:||||...||||:||||||||.::|::|:|||||||||||||||.|||||
BL01813___ycg 251 MLLVPRGTFTEQNSPFITSLKDFHLDLIMDIFNGIFIIAGFSTLTASLFA 300
BSNT_00547 67 VTTLLCTMADDGDAPKCFTLKEGKKICWPAL-LTFAGLVLSIILSLVLPK 115
||||:.|||.:||||.||..||..|:.|||| ||...|..||:|||:|||
BL01813___ycg 301 VTTLMGTMAKNGDAPACFAKKEKAKVSWPALGLTVLVLAASIVLSLILPK 350
BSNT_00547 116 NIYEHMTTAAGLMLLYTWLFIMFSSKKLTDPEGMGKTQIYCSDCCGCVRY 165
.:||||||||.|||||.|:||:.||||||.|:..|..|| |..
BL01813___ycg 351 QLYEHMTTAASLMLLYNWMFILLSSKKLTKPKMKGNVQI--------VTA 392
BSNT_00547 166 IV------------------------------------------------ 167
:|
BL01813___ycg 393 LVLILFAVSGTLFEKNSRPGFFVSLLFLAVIAAVTMLMKKKWADQEEKNG 442
BSNT_00547 167 -- 167
BL01813___ycg 443 QT 444
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