Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03971 and BL02028
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:00
# Commandline: needle
# -asequence pep-align/BSNT_03971___yrrM.1.5803.seq
# -bsequence pep-align/BL02028___yrrM.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03971___yrrM-BL02028___yrrM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03971___yrrM-BL02028___yrrM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03971___yrrM
# 2: BL02028___yrrM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 220
# Identity: 148/220 (67.3%)
# Similarity: 178/220 (80.9%)
# Gaps: 3/220 ( 1.4%)
# Score: 785.0
#
#
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BSNT_03971___ 1 MTDRYEQINDYIEALLKPRPDNVKKLEAYAEEHHVPIMEKAGMEVLLQIL 50
|...:|::..|:|.||||||..:.|||||||||.|||||..|:|||||:|
BL02028___yrr 1 MKIGHEELTGYLEKLLKPRPAEIMKLEAYAEEHGVPIMEPTGIEVLLQLL 50
BSNT_03971___ 51 SVKQPKKILEIGTAIGYSAIRMALELPSAEIYTIERNEKRHEEAVNNIKE 100
|.|.||||||||||||||||||||.||.|||:||||:|.|:.||:.||:.
BL02028___yrr 51 SFKNPKKILEIGTAIGYSAIRMALALPEAEIFTIERDEDRYREALKNIRS 100
BSNT_03971___ 101 FQLDDRIHVFYGDALELADAVHVTAPYDVIFIDAAKGQYQNFFHLYEPML 150
|||::|||||:||||..:|.|...||||.:||||||||||.||.:||.||
BL02028___yrr 101 FQLENRIHVFFGDALSESDPVQSMAPYDALFIDAAKGQYQKFFSIYEKML 150
BSNT_03971___ 151 SPDGVIITDNVLFKGLVAEDYSKIEPKRRRRLVAKIDEYNHWLMNHPDYQ 200
:.||:|.|||||||||||.:|::||.||.::||:|||.||||||.||||.
BL02028___yrr 151 ADDGIIFTDNVLFKGLVASEYNQIESKRIKKLVSKIDHYNHWLMEHPDYH 200
BSNT_03971___ 201 TAIIPVGDGLAISKKKR--- 217
|||:|||||||:|:|:.
BL02028___yrr 201 TAILPVGDGLAVSQKRGERI 220
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