Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03949 and BL02073

See DNA alignment / Visit BSNT_03949 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:58
# Commandline: needle
#    -asequence pep-align/BSNT_03949___yrhF.1.5803.seq
#    -bsequence pep-align/BL02073___yrhF.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03949___yrhF-BL02073___yrhF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03949___yrhF-BL02073___yrhF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03949___yrhF
# 2: BL02073___yrhF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 126
# Identity:      97/126 (77.0%)
# Similarity:   108/126 (85.7%)
# Gaps:           7/126 ( 5.6%)
# Score: 482.0
# 
#
#=======================================

BSNT_03949___      1 MSKKIHEFNDIIRKLRKELFGKGPERIHTVFVENMAVSTLYGNLSASEQF     50
                     ||||||||||:||||||||||||||||.||||:|||||||||||:|||||
BL02073___yrh      1 MSKKIHEFNDMIRKLRKELFGKGPERIRTVFVDNMAVSTLYGNLTASEQF     50

BSNT_03949___     51 IARTPEGREMVHAARTSLIQDLYSKQTPEGMEELMGAKLVHLFSDIKIEE    100
                     ||.|||||||||||||:|||..||...|||||||:||||.|||:||||:|
BL02073___yrh     51 IASTPEGREMVHAARTTLIQKHYSNHVPEGMEELIGAKLEHLFTDIKIQE    100

BSNT_03949___    101 NIAVSVFVFDRKIDEQKEVLQS----    122
                     :||||||:|||.|:   .|.:|    
BL02073___yrh    101 DIAVSVFIFDRNIE---GVAESAGGA    123


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