Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05481 and BL02443
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:37
# Commandline: needle
# -asequence pep-align/BSNT_05481___rbsB.1.5803.seq
# -bsequence pep-align/BL02443___rbsB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05481___rbsB-BL02443___rbsB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05481___rbsB-BL02443___rbsB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05481___rbsB
# 2: BL02443___rbsB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 305
# Identity: 231/305 (75.7%)
# Similarity: 272/305 (89.2%)
# Gaps: 1/305 ( 0.3%)
# Score: 1182.0
#
#
#=======================================
BSNT_05481___ 1 MKKAVSVILTLSLFLLTACSLEPPQWAKPSNSGNKKDFTIGLSVSTLNNP 50
|||.::|...|:|..|:|||||||:|||| |.....|..||||||||.||
BL02443___rbs 1 MKKTLTVFTALALLFLSACSLEPPEWAKP-NKEKGTDIKIGLSVSTLKNP 49
BSNT_05481___ 51 FFVSLKKGIEKEAEKRGMKVIIVDAQNDSSKQTSDVEDLIQQGVDALLIN 100
||||||.|:.|||:|:|::||:||||:||:|||:|||||:||||||||||
BL02443___rbs 50 FFVSLKNGVVKEAKKQGIEVIVVDAQDDSAKQTNDVEDLLQQGVDALLIN 99
BSNT_05481___ 101 PTDSSAISTAVESANAVGVPVVTIDRSAEQGKVETLVASDNVKGGEMAAA 150
|.|||||||||:|||::|:||||:|||||.|||||||||||||||:|||.
BL02443___rbs 100 PADSSAISTAVQSANSLGIPVVTLDRSAENGKVETLVASDNVKGGQMAAD 149
BSNT_05481___ 151 FIADKLGKGAKVAELEGVPGASATRERGSGFHNIADQKLHVVTKQSADFD 200
||.::|||||||||||||||||||||||||||..||.||:|:.||:||||
BL02443___rbs 150 FIVEQLGKGAKVAELEGVPGASATRERGSGFHKTADDKLNVIAKQTADFD 199
BSNT_05481___ 201 RTKGLTVMENLLQGHPDIQAVFAHNDEMALGALEAINSSGKDILVIGFDG 250
|||||.||||||||:|||||||||||||||||:|||.||||:|||:||||
BL02443___rbs 200 RTKGLNVMENLLQGNPDIQAVFAHNDEMALGAIEAIRSSGKEILVVGFDG 249
BSNT_05481___ 251 NKDALASIKDGKLSATVAQQPELIGKLATEAADDILHGKKVQKTISAPLK 300
|:||:.:::.|.:|||:|||||||||||.:||.|||:||||:|||.||||
BL02443___rbs 250 NEDAVKAVQAGDMSATIAQQPELIGKLAVQAARDILNGKKVEKTIPAPLK 299
BSNT_05481___ 301 LETQK 305
|||:|
BL02443___rbs 300 LETKK 304
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