Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05470 and BL02476
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:37
# Commandline: needle
# -asequence pep-align/BSNT_05470___ywtB.1.5803.seq
# -bsequence pep-align/BL02476___pgsAA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05470___ywtB-BL02476___pgsAA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05470___ywtB-BL02476___pgsAA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05470___ywtB
# 2: BL02476___pgsAA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 389
# Identity: 256/389 (65.8%)
# Similarity: 314/389 (80.7%)
# Gaps: 9/389 ( 2.3%)
# Score: 1387.0
#
#
#=======================================
BSNT_05470___ 1 MKKELSFHEKLLKLTKQQKKKTNKHVFIAIPIVFVLMFAFMWAGKAETPK 50
|||:|:|.|||||||||:||||||||||.:|::|.|||.|.|.|.|:||.
BL02476___pgs 1 MKKQLNFQEKLLKLTKQEKKKTNKHVFIVLPVIFCLMFVFTWVGSAKTPS 50
BSNT_05470___ 51 VKTYSDDV-LSASFVGDIMMGRYVEKVTEQKGADSIFQYVEPIFRASDYV 99
.....:|. |:|:|||||||||.|||||...|::|:|:.|:|.|..||::
BL02476___pgs 51 QMDKKEDAKLTATFVGDIMMGRNVEKVTNLHGSESVFKNVKPYFNVSDFI 100
BSNT_05470___ 100 AGNFENPVTYQKNYKQADKEIHLQTNKESVKVLKDMNFTVLNSANNHAMD 149
.||||||||..|:|::|:|.||||||:|||:.||.:||:|||.|||||||
BL02476___pgs 101 TGNFENPVTNAKDYQEAEKNIHLQTNQESVETLKKLNFSVLNFANNHAMD 150
BSNT_05470___ 150 YGVQGMKDTLGEFAKQNLDIVGAGYSLSDAKKKISYQKVNGVTIATLGFT 199
||..|:||||.:|:.:||::||||.:|.|||:.:|||.||||.|||||||
BL02476___pgs 151 YGEDGLKDTLNKFSNENLELVGAGNNLEDAKQHVSYQNVNGVKIATLGFT 200
BSNT_05470___ 200 DVSGKGFAAKKNTPGVLPADPEIFIPMISEAKKHADIVVVQSHWGQEYDN 249
||..|.|.||||..||||..|:||||||:||.|.||:|:|..||||||||
BL02476___pgs 201 DVYTKNFTAKKNRGGVLPLSPKIFIPMIAEASKKADLVLVHVHWGQEYDN 250
BSNT_05470___ 250 DPNDRQRQLARAMSDAGADIIVGHHPHVLEPIEVYNGTVIFYSLGNFVFD 299
:|||||:.||:|::|||||:|:|.||||||||||||||||||||||||||
BL02476___pgs 251 EPNDRQKDLAKAIADAGADVIIGAHPHVLEPIEVYNGTVIFYSLGNFVFD 300
BSNT_05470___ 300 QGWTRTRDSALVQYHLKKNGTGRFEVTPIDIHEATPAPV-KKDSLKQKTI 348
|||:||||||||||||..:|.|||||||::|.||||.|: |.|.||:|.|
BL02476___pgs 301 QGWSRTRDSALVQYHLMNDGKGRFEVTPLNIREATPTPLGKSDFLKRKAI 350
BSNT_05470___ 349 IRELTKDSNFAWKVEDGKLTFDIDHSDKLKSK------- 380
.|:|||.:|..||.|:|||||::||:||||:.
BL02476___pgs 351 FRQLTKGTNLDWKEENGKLTFEVDHADKLKNNKNGVVNK 389
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