Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00317 and BL02716
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:58
# Commandline: needle
# -asequence pep-align/BSNT_00317___ybbD.1.5803.seq
# -bsequence pep-align/BL02716___ybbD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00317___ybbD-BL02716___ybbD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00317___ybbD-BL02716___ybbD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00317___ybbD
# 2: BL02716___ybbD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 648
# Identity: 432/648 (66.7%)
# Similarity: 518/648 (79.9%)
# Gaps: 11/648 ( 1.7%)
# Score: 2205.5
#
#
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BSNT_00317___ 1 MRPVFPLILSAVLFLSCFFGARQTEASASKR-AIDANQIVNRMSLDEKLG 49
|:......|.|:|..|........||.|.:| ..:..|:|:.|||:||:|
BL02716___ybb 1 MKRFLQCALIALLLSSLALQPAAREAEAKQRPEQNIKQMVSSMSLEEKIG 50
BSNT_00317___ 50 QMLMPDFRNWQKEGESSPQALTEMNDEVASLVKKYQFGGIILFAENVKTT 99
||||||||||:|:||||.:.|||||||||.:::||:.||:|||||||..|
BL02716___ybb 51 QMLMPDFRNWKKKGESSAKGLTEMNDEVAGIIEKYRLGGVILFAENVTGT 100
BSNT_00317___ 100 KQTVQLTDDYQKASPKIPLMLSIDQEGGIVTRLGEGTNFPGNMALGAARS 149
:|||:|||..|:|||.|||.::|||||||||||..|||..||||:||:||
BL02716___ybb 101 EQTVRLTDGLQQASPDIPLFITIDQEGGIVTRLESGTNLAGNMAVGASRS 150
BSNT_00317___ 150 RINAYQTGSIIGKELSALGINTDFSPVVDINNNPNNPVIGVRSFSSNREL 199
..||:::|.|||||||:||||.:||||:|:||||:|||||||||||..||
BL02716___ybb 151 SKNAFRSGKIIGKELSSLGINVNFSPVLDVNNNPDNPVIGVRSFSSKPEL 200
BSNT_00317___ 200 TSRLGLYTMKGLQRQDIASALKHFPGHGDTDVDSHYGLPLVSHGQERLRE 249
||:||:..|||||.:.:.:..|||||||||.||||||||||.|.::|||.
BL02716___ybb 201 TSKLGIQMMKGLQDEQMIATAKHFPGHGDTAVDSHYGLPLVPHNEKRLRS 250
BSNT_00317___ 250 VELYPFQKAIDAGADMVMTAHVQFPAFDDTTYKSKLDGSDILVPATLSKK 299
|||.|||||||||.||:||||||||||||||||||.||.||:||||||||
BL02716___ybb 251 VELAPFQKAIDAGIDMIMTAHVQFPAFDDTTYKSKKDGEDIMVPATLSKK 300
BSNT_00317___ 300 VMTGLLRQEMGFNGVIVTDALNMKAIADHFGQEEAVVMAVRAGVDIALMP 349
|||.|||:::.|.||:||||||||||:|:|||||||||||:|||||||||
BL02716___ybb 301 VMTDLLRKDLSFKGVVVTDALNMKAISDNFGQEEAVVMAVKAGVDIALMP 350
BSNT_00317___ 350 ASVTSLKEEQKFARVIQALKEAVKNGDIPEQQINNSVERIISLKIKRGMY 399
|.||||:.|:..|||.:||..||||||||.:||:.|||||:.|||.||:.
BL02716___ybb 351 AQVTSLETEKNLARVFEALLTAVKNGDIPMEQIDQSVERILQLKIDRGII 400
BSNT_00317___ 400 PARNSDSTKEKIAKAKKIVGSKQHLKAEKKIAEKAVTVLKNEQHTLPFKP 449
....|:..::||..|.|.|||.:|:|.|||:|..:.|:|||::.||||||
BL02716___ybb 401 DHTGSEPLQKKIKYALKTVGSSKHMKYEKKMARDSATILKNDKSTLPFKP 450
BSNT_00317___ 450 KKGSRILIVAPYEEQTASIEQTIHDLIKRKKIKPVSVDKMNFANQVFKAE 499
|||..:||:||||||||:|.:||..: ||.||.| :..||.:.|:.|
BL02716___ybb 451 KKGDTVLILAPYEEQTAAIAKTISKI--RKNIKVV---EYRFAEKTFEEE 495
BSNT_00317___ 500 HAKQVKKADYIITGSYVVKNDPVVNDGVIDDTISDSSKWATVFPRAVMKA 549
..|::.:|||:||||||:|||||||||||||:|.|||||||.||||.||.
BL02716___ybb 496 IQKKIDEADYVITGSYVIKNDPVVNDGVIDDSIQDSSKWATAFPRAAMKY 545
BSNT_00317___ 550 ALQHNKPFVLMSLRNPYDAANFEETKALIAVYGFKGYANGRYLQPNIPAG 599
|..:.|.|||||||||||.|||||.:|:|||||||||||||:.|||||||
BL02716___ybb 546 AQANGKKFVLMSLRNPYDTANFEEAEAVIAVYGFKGYANGRFRQPNIPAG 595
BSNT_00317___ 600 VMAIFGQAKPKGTLPVDIPSVTKPGNTLYPFGYGLNIKTGRPL----- 642
|.||||:|||||||||||||||:||.||||:|||||||.|:||
BL02716___ybb 596 VEAIFGKAKPKGTLPVDIPSVTRPGETLYPYGYGLNIKNGKPLHKGGS 643
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