Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03398 and BL02794

See DNA alignment / Visit BSNT_03398 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:21
# Commandline: needle
#    -asequence pep-align/BSNT_03398___seaA.1.5803.seq
#    -bsequence pep-align/BL02794___seaA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03398___seaA-BL02794___seaA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03398___seaA-BL02794___seaA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03398___seaA
# 2: BL02794___seaA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 299
# Identity:     226/299 (75.6%)
# Similarity:   261/299 (87.3%)
# Gaps:           2/299 ( 0.7%)
# Score: 1168.0
# 
#
#=======================================

BSNT_03398___      1 MSDYIYPIIAGVIAGIATRLYMLKTDYRQYPTYVHGKVIHIALGLIAAGL     50
                     ||.|.||||.|::|||..|:|||:|||||||||:|||.|||||.||||.:
BL02794___sea      1 MSQYTYPIILGIVAGIVVRVYMLRTDYRQYPTYLHGKTIHIALALIAASI     50

BSNT_03398___     51 GAIIMPALLQEEFTAITFLTLAATQFRDVRNMERNTLTQMDSYELVSRGS    100
                     ||||:|::|:.::|||||||||||||||||||||.||||:|.||||||||
BL02794___sea     51 GAIIIPSILKSDYTAITFLTLAATQFRDVRNMERETLTQLDGYELVSRGS    100

BSNT_03398___    101 TYIEGIAIAFESRNYIVIFTALLTTSAYV-FLSIWAAVIAAVVCFLLAMK    149
                     ||||||||||||||||||||:||||.||: |.|:||.:.||::||:....
BL02794___sea    101 TYIEGIAIAFESRNYIVIFTSLLTTLAYILFSSVWAGLAAALICFIAGRI    150

BSNT_03398___    150 FMSGSVLKDIVDIEYIKPRFDGPGLFVDNIYMMNIGLPEKQELILKHGMG    199
                     .||||.:|||.||||.||.|:|.||:|||||:||||||||::|||:||||
BL02794___sea    151 LMSGSFIKDIADIEYKKPHFEGAGLYVDNIYIMNIGLPEKRKLILEHGMG    200

BSNT_03398___    200 FILTPKNFNSAATIANLGQRQAILFDVSNVLGVYRDSGEPSLTPIAKRDL    249
                     |||.|||||||.||||||||||||||||||||||||||||||:|:|||||
BL02794___sea    201 FILKPKNFNSAVTIANLGQRQAILFDVSNVLGVYRDSGEPSLSPLAKRDL    250

BSNT_03398___    250 NDGRVAVFVLPQIHHPETAVQIISNVPTLENAIRMPTEFIKNQ-DKVIG    297
                     |||||||||||.|...|||:::|.:|||||||||:|.||||.: .|||.
BL02794___sea    251 NDGRVAVFVLPVIKDKETAIRVIGDVPTLENAIRVPMEFIKEKHSKVIK    299


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