Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05935 and BL02959
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:01
# Commandline: needle
# -asequence pep-align/BSNT_05935.1.5803.seq
# -bsequence pep-align/BL02959___cimH.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05935-BL02959___cimH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05935-BL02959___cimH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05935
# 2: BL02959___cimH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 450
# Identity: 183/450 (40.7%)
# Similarity: 203/450 (45.1%)
# Gaps: 225/450 (50.0%)
# Score: 928.5
#
#
#=======================================
BSNT_05935 0 -------------------------------------------------- 0
BL02959___cim 1 MEAKTKVQHIPIQTTKEQDENFFARAMNVKIGIIPLPVYLLLFALIVTFV 50
BSNT_05935 0 -------------------------------------------------- 0
BL02959___cim 51 YMHDLKSDILTAIAVTGFFGFTFAQIGKSLPLLRSVGGAAILATFIPSAI 100
BSNT_05935 0 -------------------------------------------------- 0
BL02959___cim 101 VYYHLIPDDIIKSTTEFTENSNFLYLFISAIVVGSILGMKRETLVRAFIK 150
BSNT_05935 0 -------------------------------------------------- 0
BL02959___cim 151 IFIPLIAGTIAAAAVGLAVGTMLGLGFQHTLLYIVIPIMAGGVGEGAIPL 200
BSNT_05935 1 -----------------------MLGSLCAIILAGLLNRIGKKKPEWTGN 27
|.|||.|:||:|:||.|||||||.|||
BL02959___cim 201 SIGYSEIMHMSQGEAFALVIPSIMFGSLSAVILSGILNVIGKKKPELTGN 250
BSNT_05935 28 GKVDR--SEEESPALEESQSGQQMFNLSLFAAGGILAVSLYLVGMLAHDF 75
||||| |.:..|.....:..:.:||||.||:||||||||||||||:||.
BL02959___cim 251 GKVDRFDSGDAQPLESRDKDKESLFNLSHFASGGILAVSLYLVGMLSHDL 300
BSNT_05935 76 FGFPAPVAMLLLAVLIKLFRLVPASIENGAFGVSRFFSTAVTYPLLFAIG 125
|||||||.||||||.:|||||.||::||||:|||||||||||||||||||
BL02959___cim 301 FGFPAPVMMLLLAVALKLFRLAPANLENGAYGVSRFFSTAVTYPLLFAIG 350
BSNT_05935 126 VSMTPWDKLVAAFNLSNIITILSVVVTMMAVGFFTGKWLNMYPIETAIIN 175
|||||||||:||||::|||||:||||||:|||||.|||||||||||||||
BL02959___cim 351 VSMTPWDKLIAAFNIANIITIVSVVVTMIAVGFFAGKWLNMYPIETAIIN 400
BSNT_05935 176 ACHSGQGGTGDVAILSAAERLELMPFAQVSTRIGGAITVSLTLLLLHQFY 225
|||||||||||:|||||||||||||||||||||||||||:||||||.|||
BL02959___cim 401 ACHSGQGGTGDIAILSAAERLELMPFAQVSTRIGGAITVTLTLLLLAQFY 450
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