Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04999 and BL03007
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:11
# Commandline: needle
# -asequence pep-align/BSNT_04999___copB.1.5803.seq
# -bsequence pep-align/BL03007___yvgW.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04999___copB-BL03007___yvgW.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04999___copB-BL03007___yvgW.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04999___copB
# 2: BL03007___yvgW
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 703
# Identity: 482/703 (68.6%)
# Similarity: 568/703 (80.8%)
# Gaps: 4/703 ( 0.6%)
# Score: 2438.0
#
#
#=======================================
BSNT_04999___ 1 ---MKQEYVLDGLDCSNCAQKIENGVKGIKGIDGCAVNFAASTLTVSADG 47
:||||.|:||||||||||||:.:.|:|||:.|:||||.|||||..|.
BL03007___yvg 1 MEKVKQEYTLNGLDCSNCAQKIEHEIAGMKGIEACSVNFATSTLTVQVDQ 50
BSNT_04999___ 48 KEEQWVTNKVEKKVKSIDPHVTVRQKHIKKSADDGYRNRMVNMLIRMAAA 97
...:.::..::|||..|:|||....|...|.|......|....:.|:||.
BL03007___yvg 51 NSGEDISLIIKKKVTEIEPHVNATLKEGTKQAPPESDGRFKKTVARLAAG 100
BSNT_04999___ 98 VILGATAYLVHSGT-IELFLFLAAYLIIGGDIMIRAVKNIIRGQVFDEHF 146
.:|||..:|:..|| .|..||..||||||||:::||||||.||:||||||
BL03007___yvg 101 TVLGAAGFLLPGGTAAEWLLFFLAYLIIGGDVVLRAVKNIFRGRVFDEHF 150
BSNT_04999___ 147 LMALATIGAFLIQQYPEGVAVMLFYQIGELFQGAAVSRSRKSISALMDIR 196
||.:||:|||:|||||||||||||||||||||||||:|||||||.|||||
BL03007___yvg 151 LMTIATLGAFIIQQYPEGVAVMLFYQIGELFQGAAVTRSRKSISDLMDIR 200
BSNT_04999___ 197 PDYANLKTKNGIEQVSPEDVQTGDIIVVNPGESIPLDGKVVQGSAMVDTS 246
||||||:|:.|..:|||::|:.||||:|.|||.:||||||..|.::||||
BL03007___yvg 201 PDYANLQTEGGTVKVSPDEVKAGDIIIVKPGEKVPLDGKVRAGKSLVDTS 250
BSNT_04999___ 247 ALTGESVPRKAAVGQDVMSGFINQNGVLHIEVTKSYQESAVSKILDLVQN 296
|||||||||:||.|.:|:|||:|:||||.:||.|.|.||.||||||||||
BL03007___yvg 251 ALTGESVPREAAPGTEVLSGFVNKNGVLEVEVDKEYSESTVSKILDLVQN 300
BSNT_04999___ 297 ASSRKARTENFITKFAKYYTPAVVIIAVLLAFVPPLVLSGAALSDWVYRA 346
||||||:||||||||||||||.|||||:||||||||::|||.||||||||
BL03007___yvg 301 ASSRKAKTENFITKFAKYYTPFVVIIALLLAFVPPLIISGALLSDWVYRA 350
BSNT_04999___ 347 LIFLVISCPCALVVSIPLGFFGGIGAASKAGVLVKGSNYLEALNQVKYAV 396
|:|||||||||||||||||||||||||||||:||||.|||||||.|||||
BL03007___yvg 351 LVFLVISCPCALVVSIPLGFFGGIGAASKAGILVKGGNYLEALNDVKYAV 400
BSNT_04999___ 397 FDKTGTLTKGSFEVTEIKPAEGFTKDRLLEAAAYAELHSQHPIAESVRKA 446
||||||||||.|.|.::.||....:|.|||.||.||..|.||||||:|:|
BL03007___yvg 401 FDKTGTLTKGEFAVVKLSPASHVKEDELLEYAALAEHFSGHPIAESIREA 450
BSNT_04999___ 447 YGKMLSSDEIESYEEISGHGIFAKVNGNEILAGNKKLMEREQIEDVPDEN 496
|||.:.:|.|:.|.|.:|.|:.|.|:|..|||||.|||::..|:...:..
BL03007___yvg 451 YGKEVQADRIKDYSETAGFGVRAVVDGAVILAGNAKLMKKAGIQYQKESE 500
BSNT_04999___ 497 AGTIVHVAVDQRYAGAIIIADEIKEDAAQAVADLKSLGIKQTAMLTGDSK 546
.||:|:||....:.|:|:|||||||||.:|::.||..|||:|.|||||:|
BL03007___yvg 501 IGTVVYVAAGDTFIGSIVIADEIKEDAKRAISALKKAGIKKTVMLTGDAK 550
BSNT_04999___ 547 QTGEAVGKQLGIGEVYAELLPQDKVAQVEALEAKLSPNEKLIFVGDGIND 596
.||||||:||.|.||:||||||.||.::|.|:.:..|.|||:|.||||||
BL03007___yvg 551 DTGEAVGEQLSIDEVHAELLPQHKVDRIETLDKQKLPKEKLLFAGDGIND 600
BSNT_04999___ 597 TPVLARADIGIAMGGLGSDAAVEAADIVLMTDQPSKIAEAIRIAKRTRRI 646
||||||||||:|||||||||||||||||:||||||||||||.||||||.|
BL03007___yvg 601 TPVLARADIGVAMGGLGSDAAVEAADIVIMTDQPSKIAEAISIAKRTRTI 650
BSNT_04999___ 647 VWQNIGFALGVKAIFLILGAFGIATMWEAVFSDVGVTLLAVANAMRVMRL 696
|||||.||||||.:|||||||||||||||||||||||||||.|||||:::
BL03007___yvg 651 VWQNIIFALGVKGVFLILGAFGIATMWEAVFSDVGVTLLAVLNAMRVLKV 700
BSNT_04999___ 697 KNK 699
|..
BL03007___yvg 701 KEM 703
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