Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00986 and BL03095

See DNA alignment / Visit BSNT_00986 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:31
# Commandline: needle
#    -asequence pep-align/BSNT_00986___ydhE.1.5803.seq
#    -bsequence pep-align/BL03095___ydhE.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00986___ydhE-BL03095___ydhE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00986___ydhE-BL03095___ydhE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00986___ydhE
# 2: BL03095___ydhE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 404
# Identity:     272/404 (67.3%)
# Similarity:   336/404 (83.2%)
# Gaps:           9/404 ( 2.2%)
# Score: 1476.0
# 
#
#=======================================

BSNT_00986___      1 MKTVLILNFPAEGHVNPTLGITKAFSDKGYDVHYISTEKYKKRLEAAGAT     50
                     ||.:||:||||||||||||||||||:|:|.:|||:||||||.|||..|||
BL03095___ydh      1 MKNILIVNFPAEGHVNPTLGITKAFADRGDNVHYLSTEKYKDRLEGVGAT     50

BSNT_00986___     51 VHLHRDLLRTTPIHVGSPNGILDFVKIHIKTSLDILQIVKDLSKSIQFDF    100
                     |||::||:|...|...||:|:|:|:|||:||||.||.|||:|||||.||.
BL03095___ydh     51 VHLYKDLVRNAHIDPNSPSGLLEFLKIHLKTSLYILDIVKELSKSISFDV    100

BSNT_00986___    101 VYYDKFGAGELVRDYLDIPGVSSSASFLFGEEHLKILPLHPESGAPLELD    150
                     ||||.|||||||||||:|||::||||||||:||.|||||||:|||.|.||
BL03095___ydh    101 VYYDTFGAGELVRDYLNIPGIASSASFLFGQEHKKILPLHPDSGAELHLD    150

BSNT_00986___    151 QECEDLLAKMKETYGVAPKNLVQFMNNKGELNVVYTSRYFQPESDRFGDE    200
                     :|||||||::||.|||:|::..|||:|:.||.||||||||||:|.||||:
BL03095___ydh    151 KECEDLLAELKEKYGVSPRHTGQFMSNQAELTVVYTSRYFQPDSGRFGDD    200

BSNT_00986___    201 CLFIGPSFPKRAEKTDFPIEQLKDESVIYISMGTVLDHTEDFFNLCIDAF    250
                     .|||||.||||.:|||||:|.||:|.||||||||||..|.||||:|||||
BL03095___ydh    201 VLFIGPRFPKRLDKTDFPVESLKNEKVIYISMGTVLGKTADFFNMCIDAF    250

BSNT_00986___    251 SGFNGKVVIAAGEKADLTKLKQAPENFIIAPYVPQLEVLEQSDVFITHGG    300
                     ..|:||||||||||:|..::|:.||:|||||||||||||:::||||||||
BL03095___ydh    251 RDFDGKVVIAAGEKSDYAEIKEVPEHFIIAPYVPQLEVLKEADVFITHGG    300

BSNT_00986___    301 MNSVNEGIHFSVPLVVMPHDKDQPMVAQRLSELHAGYVISKDEVNAQILK    350
                     |||||||||:.||:||:||||||||:||||.||:|||.:..:||||:.|:
BL03095___ydh    301 MNSVNEGIHYRVPMVVLPHDKDQPMIAQRLKELNAGYPLFAEEVNAERLR    350

BSNT_00986___    351 QAVDEVLRNDQYMAGIKKINQSFKECMDMEEVMERIDELIRQKNK-----    395
                     .|.::||.:.:|..||:||::||..|||:::.:.||||...:|..     
BL03095___ydh    351 DAAEQVLTDGKYQEGIQKIDESFSNCMDIKDALARIDEYTARKKVAAAIT    400

BSNT_00986___    395 ----    395
                         
BL03095___ydh    401 ESRY    404


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