Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04452 and BL03289

See DNA alignment / Visit BSNT_04452 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:38
# Commandline: needle
#    -asequence pep-align/BSNT_04452___ytmA.1.5803.seq
#    -bsequence pep-align/BL03289.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04452___ytmA-BL03289.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04452___ytmA-BL03289.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04452___ytmA
# 2: BL03289
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 266
# Identity:     196/266 (73.7%)
# Similarity:   230/266 (86.5%)
# Gaps:           9/266 ( 3.4%)
# Score: 1076.0
# 
#
#=======================================

BSNT_04452___      1 MIVEKRRFPSPSQHVRLYTICYLSNGLRVKGLLAEPAEPGQYDGFLYLRG     50
                     |.:||||||||::.|||:::.|||.||:|||||||||.||.|||||||||
BL03289            1 MWIEKRRFPSPNKEVRLFSVTYLSQGLKVKGLLAEPAAPGNYDGFLYLRG     50

BSNT_04452___     51 GIKSVGMVRPGRIIQFASQGFVVFAPFYRGNQGGEGNEDFAGEDREDAFS    100
                     |||:|||||||||:|||||||||.||||||||||||:|||||.||||||:
BL03289           51 GIKNVGMVRPGRIVQFASQGFVVLAPFYRGNQGGEGDEDFAGNDREDAFA    100

BSNT_04452___    101 AFRLLQQHPNVKKDRVHIFGFSRGGIMGMLTAIEMGGQAASFVSWGGVSD    150
                     ||||||:|..||..||||||||||||||:||||||...||||||||||||
BL03289          101 AFRLLQKHELVKDGRVHIFGFSRGGIMGILTAIEMKAAAASFVSWGGVSD    150

BSNT_04452___    151 MILTYEERQDLRRMMKRVIGGTPKKVPEEYQWRTPFDQVNKIQAPVLLIH    200
                     |::||.||:||||||||||||||:||||.|:||||||::.||:|||||||
BL03289          151 MVMTYRERKDLRRMMKRVIGGTPEKVPEAYEWRTPFDELEKIEAPVLLIH    200

BSNT_04452___    201 GEKDQNVSIQHSYLLEEKLKQLHKPVETWYYSTFTHYFPPKENRRIVRQL    250
                     |..|:||||:|:..||.:|.:.:|.|:|||:|.:||||||:|||||||:|
BL03289          201 GANDENVSIEHARRLERELLRRNKSVDTWYFSQYTHYFPPRENRRIVREL    250

BSNT_04452___    251 TQWMKNR---------    257
                     :||||:|         
BL03289          251 SQWMKSRPWTSYGKLK    266


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