Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05383 and BL03371
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:31
# Commandline: needle
# -asequence pep-align/BSNT_05383___yviE.1.5803.seq
# -bsequence pep-align/BL03371___yviE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05383___yviE-BL03371___yviE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05383___yviE-BL03371___yviE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05383___yviE
# 2: BL03371___yviE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 191
# Identity: 124/191 (64.9%)
# Similarity: 162/191 (84.8%)
# Gaps: 3/191 ( 1.6%)
# Score: 696.0
#
#
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BSNT_05383___ 1 MQIPRLIMHSVQGKIGLTTTPASLKMEQPQADLEIEQPSAEMEISVTPGK 50
|::|||||.::.|:|||||||..||||||:|||:||||.||::|:.||.|
BL03371___yvi 1 MEMPRLIMQNIPGRIGLTTTPPDLKMEQPRADLKIEQPPAELKITTTPSK 50
BSNT_05383___ 51 LTIDQTQAWEELDRKHVFKRIEEAAQQGHEDVMKGIARTAEEGDELMRIE 100
||||||:|||:|:|||:||||||.||||::|.:.|:|||||||||:||||
BL03371___yvi 51 LTIDQTKAWEDLERKHIFKRIEEGAQQGYQDWLAGMARTAEEGDEMMRIE 100
BSNT_05383___ 101 NKGNPIASQARRNSEMHQIQLGENYAPSLSRVKIQYTPSQLDVQITPRKP 150
.:|||:|.|||||||...||:|.::.||..||||.|.|::::::.|||||
BL03371___yvi 101 IEGNPLADQARRNSEPEPIQIGVHFTPSFDRVKIAYEPAKVNIEATPRKP 150
BSNT_05383___ 151 VIQAEPHKPIVEYTPGNVKVDMLQYPDLNIDVEYPKESPEK 191
:|:|.|:||:|.||||:|||||||||::.|||||||:.
BL03371___yvi 151 IIEATPNKPVVNYTPGSVKVDMLQYPEVKIDVEYPKQK--- 188
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