Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05341 and BL03398

See DNA alignment / Visit BSNT_05341 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:27
# Commandline: needle
#    -asequence pep-align/BSNT_05341___yvlC.1.5803.seq
#    -bsequence pep-align/BL03398___yvlC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05341___yvlC-BL03398___yvlC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05341___yvlC-BL03398___yvlC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05341___yvlC
# 2: BL03398___yvlC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 66
# Identity:      41/66 (62.1%)
# Similarity:    56/66 (84.8%)
# Gaps:           1/66 ( 1.5%)
# Score: 225.0
# 
#
#=======================================

BSNT_05341___      1 MNKLYRSEKNKKIAGVIGGLAEYFNWDASLLRVITVILAIMTSVLPVLLI     50
                     |.:|:|||.::|||||:||||||.|.||||||:|||:|.|.::.:|||||
BL03398___yvl      1 MKRLFRSETDRKIAGVVGGLAEYLNMDASLLRIITVLLFIFSTGVPVLLI     50

BSNT_05341___     51 YIIWIFIVPSERDMK-     65
                     ||:|:|:||:|.|:. 
BL03398___yvl     51 YIVWVFLVPNEGDVNR     66


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