Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02261 and BL03528
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:46
# Commandline: needle
# -asequence pep-align/BSNT_02261___ykoY.1.5803.seq
# -bsequence pep-align/BL03528___ykoY.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02261___ykoY-BL03528___ykoY.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02261___ykoY-BL03528___ykoY.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02261___ykoY
# 2: BL03528___ykoY
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 324
# Identity: 208/324 (64.2%)
# Similarity: 229/324 (70.7%)
# Gaps: 69/324 (21.3%)
# Score: 1071.0
#
#
#=======================================
BSNT_02261___ 1 MYSGNKVVISWIVSIGFVGMPEFMSSKTFALCRQRSFLHGPAGIRSDEEK 50
BL03528___yko 0 -------------------------------------------------- 0
BSNT_02261___ 51 ENNFFGRVSFMDAALLLEYGWVLLVLIGLEGILAADNALVMAVMVKHLPE 100
||||||||||||||:|:|||||||||||||||||||||||
BL03528___yko 1 ----------MDAALLLEYGWVLLILVGLEGILAADNALVMAVMVKHLPE 40
BSNT_02261___ 101 EKRKKALFYGLAGAFVLRFGSLFAISFLVNVWQVQAIGAIYLLYISASHL 150
:.||||||||||||||:|||:||||||||||||:|||||:||||||..|:
BL03528___yko 41 KDRKKALFYGLAGAFVMRFGALFAISFLVNVWQLQAIGAVYLLYISVHHI 90
BSNT_02261___ 151 LKRYVFKKEDTHKETKQSGFWPTVLKVELADIAFAVDSILAAVALAVTLP 200
||.:||||::..||||||||||||:|||||||||||||||||||||||||
BL03528___yko 91 LKTHVFKKDEKVKETKQSGFWPTVIKVELADIAFAVDSILAAVALAVTLP 140
BSNT_02261___ 201 GTSLPKIGGLDGGQFLVILAGGIIGLVIMRFAASMFVKLLKERPSLETAA 250
.|:||:|||||||||:||||||||||:|||||||.||.|||:||||||||
BL03528___yko 141 ATNLPQIGGLDGGQFMVILAGGIIGLIIMRFAASQFVNLLKKRPSLETAA 190
BSNT_02261___ 251 FVIVGWVGVKLALYTLAHRDIAVVSEHFIHSGTWKLIFWGVLAAIAVCGW 300
|:|||||||||.||||||..|.:||||||||||||.|||.||.|||:.||
BL03528___yko 191 FLIVGWVGVKLTLYTLAHPQINIVSEHFIHSGTWKFIFWAVLIAIALGGW 240
BSNT_02261___ 301 FMSGGKKQPEGAQNEQRNSTRERA 324
||:...|....|..|
BL03528___yko 241 FMTNPNKHENKAAEE--------- 255
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