Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00507 and BL03701

See DNA alignment / Visit BSNT_00507 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:08
# Commandline: needle
#    -asequence pep-align/BSNT_00507___ycdI.1.5803.seq
#    -bsequence pep-align/BL03701.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00507___ycdI-BL03701.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00507___ycdI-BL03701.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00507___ycdI
# 2: BL03701
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 264
# Identity:      87/264 (33.0%)
# Similarity:   141/264 (53.4%)
# Gaps:          39/264 (14.8%)
# Score: 407.5
# 
#
#=======================================

BSNT_00507___      1 --MNLVSLKDIVFGYSHTPVLDKVSLDIESGEFVGITGPNGASKSTLIKV     48
                       ..::.:|.:.:.|.|..|::.::|.||.|.|:|:.||||:.|:||:|.
BL03701            1 MKQPIIEMKHVSYSYDHRNVIEDINLQIEEGTFLGLVGPNGSGKTTLLKC     50

BSNT_00507___     49 MLGMLKPWEGT-----VTISKRNTEGKRLTIGYVPQQISSFNAGFPSTVL     93
                     :||::||..|.     |.:.|.....|   ||:|.|:.:|||.|||::|.
BL03701           51 ILGLIKPQTGELKLFGVPLRKFKDWSK---IGFVSQKANSFNTGFPASVY     97

BSNT_00507___     94 ELVQSGRYTKGKWFKRLNEEDHLEVEKALKMVEMWELRHRKIGDLSGGQK    143
                     |:|.||...|...|:|:::.|..:|::|::.|.:..|:.|.||:|||||:
BL03701           98 EVVASGLTAKLGLFRRMSKADKQKVDEAIEAVGITSLKDRNIGELSGGQQ    147

BSNT_00507___    144 QKICIARMLASNPDLLMLDEPTTAVDYDSRKGFYEFMHHLVKNHNRTVVM    193
                     |:..|||.|.|.|.||:|||||..||..:.:|||:.:..|.:....|:::
BL03701          148 QRTFIARALVSEPKLLILDEPTVGVDQKTVEGFYKLLEKLNREKGITLIL    197

BSNT_00507___    194 VTHEQNEVQQFLDKVIRLE--------RGEKGGWKCLTWNSCDELF----    231
                     |||:...|.   |||..:.        .|....::.:|.....:.:    
BL03701          198 VTHDVGTVS---DKVTHVACMNKHLHFHGNTEEFESMTDQDLSQFYGHDV    244

BSNT_00507___    231 --------------    231
                                   
BL03701          245 QAISHNHHHHGGHE    258


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