Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05906 and BL03840
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:59
# Commandline: needle
# -asequence pep-align/BSNT_05906___licR.1.5803.seq
# -bsequence pep-align/BL03840___licR.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05906___licR-BL03840___licR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05906___licR-BL03840___licR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05906___licR
# 2: BL03840___licR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 649
# Identity: 361/649 (55.6%)
# Similarity: 493/649 (76.0%)
# Gaps: 21/649 ( 3.2%)
# Score: 1922.5
#
#
#=======================================
BSNT_05906___ 1 -------------MAAEAPVTSSFFAAQLNVTMRTARNDIKELQGVLSGH 37
:.||:|:||::.|.:||||.||.|:|:|||..:||.:
BL03840___lic 1 MLNARLKLILGELIGAESPLTSAYLANELNVTSRTIRSDVKELDRLLSKN 50
BSNT_05906___ 38 GAFVQSVRGSGYKLRIDDEQVFRTLLQDVFQQKKGLPVLPEERMAYLMKR 87
||.|||:||:||:|.|.::::||.|||..|.|:...||.|.||:.||:||
BL03840___lic 51 GAAVQSIRGAGYRLSIKNDRLFRQLLQHTFHQELSTPVFPNERILYLLKR 100
BSNT_05906___ 88 LLLADHYLKLDELAEELFISKSTLQTDLKEVKKRLLPYRIVMETRPNYGF 137
|||.:.|:||::||.|::|||||:|.|:::|||||.||.|.::.:|||||
BL03840___lic 101 LLLTEEYVKLEDLAAEMYISKSTVQNDMRDVKKRLKPYDIELKIKPNYGF 150
BSNT_05906___ 138 KLRGDEVQMRYCMAEYIVDERETEIDVLNEKADILPKEEIEIIRSAILKK 187
||:|||:::|.|:||::..:|||:||::|.:..||||||:.:||..||:|
BL03840___lic 151 KLKGDEMKLRSCIAEHLFPKRETDIDIMNTRISILPKEELAMIRQTILEK 200
BSNT_05906___ 188 MKNDRIPLSNMGLNNLIIHIAIACKRIRTENYVSLFPKDMDHILHQKEYQ 237
:..|:|.||::|||||:||:||||||||:..:|||:.||:..|::.|||:
BL03840___lic 201 ISEDQISLSDIGLNNLLIHVAIACKRIRSGKHVSLYSKDVKEIMNHKEYE 250
BSNT_05906___ 238 AAEAIVKELESKLSVTFPKEETAYITMHLLGTKR--MTQSQCGE-DTFSI 284
.|.|||:.||.||.|.||::|||||.:||||.|| |...:.|. ::...
BL03840___lic 251 VARAIVRTLEQKLHVAFPEKETAYIAIHLLGAKRTVMAAIRSGAIESMMD 300
BSNT_05906___ 285 EEETDQLTLAMIKAVDRELKLGILHDKELKIGLALHMKPAISRNRYGMNL 334
|||||:||..::|.:|::..|||..||||||||.||:|||::|.|||||:
BL03840___lic 301 EEETDRLTQLIMKTIDQKFTLGIGDDKELKIGLGLHLKPALNRCRYGMNI 350
BSNT_05906___ 335 RNPMLAAIKEHYPLAFEAGIIAGIVIKEQTGIEIHENEIGYLALHFGAAI 384
|||||.|||.:|||||||||.||.|||.:||.:|.|:|:||||||.|||:
BL03840___lic 351 RNPMLDAIKANYPLAFEAGIQAGEVIKRETGFDIQESEVGYLALHIGAAM 400
BSNT_05906___ 385 ERKKTESPPKRCIIVCASGAGSAQLLREKLRSHFGKRLDILGTAEYYSLD 434
||:....|.|||:||||||||||.||:::||:.||.:|:||||.:||.|:
BL03840___lic 401 ERRNMNRPSKRCMIVCASGAGSAMLLQDRLRATFGSKLEILGTVDYYKLN 450
BSNT_05906___ 435 QMSYESIDFVISTIPIKKELPVPVLKVNTILGGTDFTKIESILSDEKEKA 484
|||..::||||||||:..:||:||::|||||||.|.||||.:|:::...|
BL03840___lic 451 QMSLHALDFVISTIPLSDDLPIPVIQVNTILGGGDLTKIEQVLAEDDGIA 500
BSNT_05906___ 485 NRYLKKELVFFQEDLRSKEEVIQFLGQKAVECGFAREEIIDSIFEREDMS 534
:.|.:|||||.:|.|.|:|:|::||..|..:.|.|...:..|:||||.::
BL03840___lic 501 STYTRKELVFLRESLSSREDVLRFLCGKVTQSGLADAGLEASVFEREAVA 550
BSNT_05906___ 535 PTCFGNLVAIPHPLVPQTKTTFWAVCTLKKPIDWESQRVQFVCLLCVEKE 584
|||||||||||||:.|:|.:||||||||:|||.||::||||||||||||:
BL03840___lic 551 PTCFGNLVAIPHPMTPKTASTFWAVCTLQKPIVWENKRVQFVCLLCVEKD 600
BSNT_05906___ 585 NKADLQSMYKLLGSILDDPAAVNQLVKCRSYQELSDVFDQKMLS----- 628
|.|:||.|||.||.:|||.|.|.:|:||::|.|...||.:...:
BL03840___lic 601 NTANLQEMYKFLGRVLDDRAIVRELLKCKTYGEFMSVFKKSGPAHRYAK 649
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