Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05738 and BL03919

See DNA alignment / Visit BSNT_05738 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:50
# Commandline: needle
#    -asequence pep-align/BSNT_05738___ywhD.1.5803.seq
#    -bsequence pep-align/BL03919___ywhD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05738___ywhD-BL03919___ywhD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05738___ywhD-BL03919___ywhD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05738___ywhD
# 2: BL03919___ywhD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 173
# Identity:     154/173 (89.0%)
# Similarity:   161/173 (93.1%)
# Gaps:           3/173 ( 1.7%)
# Score: 810.0
# 
#
#=======================================

BSNT_05738___      1 MEE-KKKKSIGFNIIKSDPTDGHGGFGVGALSLDNISPVFVDVEEKEAFV     49
                     ||: ||||:||||||||||||||||||.|||||||||||.||||||||||
BL03919___ywh      1 MEQGKKKKTIGFNIIKSDPTDGHGGFGAGALSLDNISPVIVDVEEKEAFV     50

BSNT_05738___     50 DIGAMHARSTVEKGIKFLPNKEEVPNGKPYWLVWVTIDRKEEGPYYAGVT     99
                     |||||||||||||||||||||||||||||||||||||||:||||||||||
BL03919___ywh     51 DIGAMHARSTVEKGIKFLPNKEEVPNGKPYWLVWVTIDRREEGPYYAGVT    100

BSNT_05738___    100 ACEMTVDRSIRRGYKSLPEHVNLMDKSMKRKIIVDKMDDSSKRVLGEFLK    149
                     ||||||||||||||||||||||||||||||||||:.||:.|||||.:|||
BL03919___ywh    101 ACEMTVDRSIRRGYKSLPEHVNLMDKSMKRKIIVEHMDEGSKRVLADFLK    150

BSNT_05738___    150 KHDQGLWDRSSDELKTSLLPENN    172
                     .||||||||||||||..||.:  
BL03919___ywh    151 NHDQGLWDRSSDELKKGLLQQ--    171


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