Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05736 and BL03962
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:50
# Commandline: needle
# -asequence pep-align/BSNT_05736___ywhE.1.5803.seq
# -bsequence pep-align/BL03962___ywhE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05736___ywhE-BL03962___ywhE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05736___ywhE-BL03962___ywhE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05736___ywhE
# 2: BL03962___ywhE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 695
# Identity: 455/695 (65.5%)
# Similarity: 563/695 (81.0%)
# Gaps: 8/695 ( 1.2%)
# Score: 2470.5
#
#
#=======================================
BSNT_05736___ 1 MDAMTNKRLRLTLKTVRAFIFLGAFAALAAAAVFMTVILIAKYQGAPSVQ 50
||.||:||:|||:||:|||:|:||...:..:.|.|||:|.||:|||||:|
BL03962___ywh 1 MDIMTDKRVRLTIKTIRAFLFMGALMLIFLSIVVMTVVLAAKWQGAPSIQ 50
BSNT_05736___ 51 VPQSTILYASDGSKLGETNYGEKRYWVPLKDMNPTIVKATVAIEDQNFYD 100
||:||:||...|.::|||:||:|||||.||::||.::.||:|:||:||:.
BL03962___ywh 51 VPRSTVLYDGSGKQMGETHYGQKRYWVSLKNINPAVIDATLAVEDRNFFR 100
BSNT_05736___ 101 HHGFDYKRMAGAALADLKAFAKVQGASTITQQYARNLYLEHDKTWKRKWN 150
||||||.||.||.:|||||.:||||||||||||||||||.||||||||||
BL03962___ywh 101 HHGFDYMRMGGALIADLKAMSKVQGASTITQQYARNLYLGHDKTWKRKWN 150
BSNT_05736___ 151 EAFYTIRLEQNYSKDEILEGYLNTIYYGHGAYGIEAASRLYFGKHAKNLT 200
||||||||||||:|.:||||||||||||||||||||||||||||.||::.
BL03962___ywh 151 EAFYTIRLEQNYTKKDILEGYLNTIYYGHGAYGIEAASRLYFGKRAKDIN 200
BSNT_05736___ 201 DAEAALLAGIPKGPSGYSPYVNETKAKERQKTIVRMMEKQQMISQKKADE 250
.||||:|||||||||.|||:|||.||||||:.|:.|||||..:::.:|..
BL03962___ywh 201 TAEAAMLAGIPKGPSVYSPFVNEKKAKERQEMILTMMEKQNKLTEMQAAA 250
BSNT_05736___ 251 LIKEPLSYQPLNKQVSKRKAPYFYDNAMRELEKKLGMTREQIETSGLNVY 300
|.|.||.::..:||.:::.||||||.|::|:.:.|.:|.||.||.|.||:
BL03962___ywh 251 LKKMPLRFEKQDKQTTEKTAPYFYDEAVKEISRLLRLTPEQAETGGYNVF 300
BSNT_05736___ 301 TTVDKRMQRIAEETITETVNAGSDIQVGFSAIDPRTGNVLALVGGRDYQK 350
||::.|:|:|||:||..|:::.||||.||:||:|..|:||||||||||:|
BL03962___ywh 301 TTLNPRLQKIAEDTIEHTIDSSSDIQAGFAAINPSDGSVLALVGGRDYEK 350
BSNT_05736___ 351 SPFDRTTQAKRQPASTIKPLLYYKAIQSGFTPVTLMKSEETEFQIDAKGE 400
|||:|.|||.|||.||:||.|||.|:|:||||.|.|:|.||.|:: .:|.
BL03962___ywh 351 SPFNRVTQAMRQPGSTMKPFLYYSAVQNGFTPATRMRSAETTFEL-GQGS 399
BSNT_05736___ 401 TYSPSNYNGYYANKPITLLQALALSDNIYAVKTHLFLGTNKLVKTAKEFG 450
.||||||:||||:.||||||||||||||||||||||||.:||:..||:||
BL03962___ywh 400 AYSPSNYHGYYADGPITLLQALALSDNIYAVKTHLFLGMDKLIDAAKQFG 449
BSNT_05736___ 451 ITAHLQALPSLALGTEPVRPIEMVNAYAMLANGGKKIEPTFISRVTDAAG 500
|.:.||.:|||||||.||:||||||.|||.|||||||||:||:::||..|
BL03962___ywh 450 INSPLQKVPSLALGTSPVKPIEMVNGYAMFANGGKKIEPSFITKITDPNG 499
BSNT_05736___ 501 HVLYENPNQHKQVLDEKAAFVTASMMTGMFDTDLNGYTSVTGRTIANRLT 550
.||||.|.:.||:||.||||:||:||:||||..|||||||||||||::||
BL03962___ywh 500 KVLYEKPKRSKQILDPKAAFITANMMSGMFDKSLNGYTSVTGRTIADQLT 549
BSNT_05736___ 551 RTYAGKSGTTSADSWMIGFNPKLAAGVWTGYDKNSTIDSVEEKSYAKTIW 600
|.|||||||||.|||||||.|.||:||||||||..|||:|.||:|||.||
BL03962___ywh 550 RRYAGKSGTTSTDSWMIGFYPGLASGVWTGYDKERTIDAVAEKNYAKQIW 599
BSNT_05736___ 601 ADFMENALKGDPETAFKPPKGVTGVYIDPETGYSSGPGCAAKHYTYFVKG 650
|:|||.||:..|..|..||:||.|:||||.|||::.|.|.:|::.||:||
BL03962___ywh 600 AEFMEKALEDAPAAALMPPEGVKGMYIDPATGYAAAPSCPSKYFAYFIKG 649
BSNT_05736___ 651 TEPANVCYGAEPAKQTKDRLPSKEKPAS----EKKWWDKWLGRHH 691
|||..||||.|..|:.. ...||||: .:|||:||..:..
BL03962___ywh 650 TEPEQVCYGKEIYKEQN---AGHEKPAAPPHKRQKWWEKWFKKGE 691
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