Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04669 and BL05320

See DNA alignment / Visit BSNT_04669 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:49
# Commandline: needle
#    -asequence pep-align/BSNT_04669___yuzC.1.5803.seq
#    -bsequence pep-align/BL05320___yuzC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04669___yuzC-BL05320___yuzC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04669___yuzC-BL05320___yuzC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04669___yuzC
# 2: BL05320___yuzC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 126
# Identity:      42/126 (33.3%)
# Similarity:    66/126 (52.4%)
# Gaps:          18/126 (14.3%)
# Score: 210.5
# 
#
#=======================================

BSNT_04669___      1 MRYRYP----WFYVYPYEVRRPPAPANNIDTFIRSARQAAGIFADAQLVL     46
                        ..|    |.:.|.:...|...|...:...:|||::|..:.||.|.:|
BL05320___yuz      1 ---MLPPHCFWMHPYQHVSCRQVYPEVQVSALLRSAKEAESLMADGQRIL     47

BSNT_04669___     47 GRIAGSRELSRRILTAAEQSDKQTIKRLIKQMGVRHEVDTVFNPDGIYIS     96
                     .|::.||.|:::|:|||:.:.|..:...::|.|||.::|..|:||||.|.
BL05320___yuz     48 SRLSASRTLAQQIMTAAQSNQKNNVLAALRQTGVRSQLDASFDPDGIRIM     97

BSNT_04669___     97 LIGTQSRIILALRWSEDRNHFASIRL    122
                     ||..:||:.|.||||           
BL05320___yuz     98 LISPRSRLFLLLRWS-----------    112


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