Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06131 and BPUM_0236
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:37
# Commandline: needle
# -asequence pep-align/BSNT_06131___yxaG.1.24716.seq
# -bsequence pep-align/BPUM_0236___yxaG.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06131___yxaG-BPUM_0236___yxaG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06131___yxaG-BPUM_0236___yxaG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06131___yxaG
# 2: BPUM_0236___yxaG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 374
# Identity: 124/374 (33.2%)
# Similarity: 181/374 (48.4%)
# Gaps: 64/374 (17.1%)
# Score: 550.0
#
#
#=======================================
BSNT_06131___ 1 MKTLCTHSLPKEKMPYLLR----------SGEGERYLFGRQVATVMANGR 40
..:.|..:: ||.|:.|....|:..|:|...
BPUM_0236___y 1 ----------MSEQPQSIKQSEGTSFYTVSGSGKLYGLENQLVHVLAEAN 40
BSNT_06131___ 41 STGDLFEIVLLSGGKGDAFPLHVHKDTHEGILVLDGKLELTLDGERYLLI 90
.|..|||:||::||||..||||.|:...|.|.||:||||:.|||::|::.
BPUM_0236___y 41 QTNQLFELVLITGGKGAYFPLHCHEHLFETIFVLEGKLEVILDGKKYMVT 90
BSNT_06131___ 91 SGDYANIPAGTPHSYRMQSHRTRLVSYTMKGNVAHLYSVIGNPYDHAEHP 140
:.||.:||..|.|.|||.||:||.:|||:.|.:..:|..||......|.|
BPUM_0236___y 91 AFDYIHIPPKTIHGYRMHSHKTRFISYTLGGKMTDVYQQIGKKLKRNEWP 140
BSNT_06131___ 141 --PYASEEVSNERFAEAAAVADIVFLDEGKPACSAKLAELTE-------- 180
..|.:..| |.:|...:|::.:...: :|:..|:
BPUM_0236___y 141 MTDLAFDAAS---FEQAEKESDLILMHGIR-----QLSNTTKPSVLFHSL 182
BSNT_06131___ 181 LPDGAVPYVLESGEGDRLLTGDQLHRIVAAQKNTDGQFIVVSSEGPKGDR 230
||....|||||:|||.:.:...|||.::|..:.|.|.|.....||.||..
BPUM_0236___y 183 LPQAVQPYVLEAGEGKQYIVDGQLHELIATTETTGGGFTHFVIEGAKGKY 232
BSNT_06131___ 231 IVDHYHEHHTETFYCLEGQMTMWADGQEIQLNPGDFLHVPANTVHSYRLD 280
...|||:.|||..||:||:|.:..:|::|.|.||||.::|..|||||...
BPUM_0236___y 233 FPPHYHQVHTEALYCVEGKMNLQLNGEDICLMPGDFAYIPPYTVHSYEFV 282
BSNT_06131___ 281 SHYTKMVGVLVPGLFEPFFRTLGD-------PY---EGHIFPCEPQALHF 320
||..|.:.:|:||..|..:....: || ||::......:..:
BPUM_0236___y 283 SHSNKFLLLLLPGKIEQLYEQFEEAQSPSICPYFIQEGNLMIDRETSSQY 332
BSNT_06131___ 321 DRVLQNIEALDLKVDYRADIVSAR 344
|.|. ||..
BPUM_0236___y 333 DLVF--IEKG-------------- 340
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