Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05742 and BPUM_0238

See DNA alignment / Visit BSNT_05742 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:18
# Commandline: needle
#    -asequence pep-align/BSNT_05742___ywhA.1.24716.seq
#    -bsequence pep-align/BPUM_0238.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05742___ywhA-BPUM_0238.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05742___ywhA-BPUM_0238.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05742___ywhA
# 2: BPUM_0238
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 145
# Identity:      95/145 (65.5%)
# Similarity:   116/145 (80.0%)
# Gaps:           6/145 ( 4.1%)
# Score: 497.0
# 
#
#=======================================

BSNT_05742___      1 MDHDKLEANLLDHALTKYLKSTKQLDEATVPKHVNNVRGFILRIIYRHGS     50
                     |.|.:|||:|||||||||||:|||:||..:||:|.||:||||||||||.|
BPUM_0238          1 MQHFELEASLLDHALTKYLKATKQIDEENIPKNVTNVKGFILRIIYRHQS     50

BSNT_05742___     51 CTIKDILKEVTLSPSATTTALNHLEQEGFIERSRNNNDRRTVWITLSESG    100
                     ||:|:||:||:||||||||||||||.||.|.|||||||||||||.|||||
BPUM_0238         51 CTVKNILQEVSLSPSATTTALNHLEDEGLIIRSRNNNDRRTVWIELSESG    100

BSNT_05742___    101 RGAAEQMIENRQQLIDGMFERLTAEEKETFLAIIAKLAQ------    139
                     ...|:|||:|||.|::.:|..|:.|:|:||..:|.|:..      
BPUM_0238        101 EQIAKQMIDNRQLLVNQLFNHLSEEDKKTFFELIEKMMDEHTLKA    145


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