Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00730 and BPUM_0239
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:30
# Commandline: needle
# -asequence pep-align/BSNT_00730___ydaB.1.24716.seq
# -bsequence pep-align/BPUM_0239___ydaB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00730___ydaB-BPUM_0239___ydaB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00730___ydaB-BPUM_0239___ydaB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00730___ydaB
# 2: BPUM_0239___ydaB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 503
# Identity: 256/503 (50.9%)
# Similarity: 345/503 (68.6%)
# Gaps: 1/503 ( 0.2%)
# Score: 1337.0
#
#
#=======================================
BSNT_00730___ 1 METLQHLILHDMPNSEEIEAVKSGDHTLTYKGYRKRINQLANAMLQKGIQ 50
|.|||.|:...|..|.:||||..|..:.|::.|.|||:|||:.:.||||:
BPUM_0239___y 1 MNTLQALLNDRMERSSQIEAVTGGGVSYTFEEYAKRIDQLAHYLHQKGIR 50
BSNT_00730___ 51 KGDRVALLCKNGHPASTVMFAALEIGAVVVPVSWQLKPYEMTGILKASEP 100
||.||..:|:|.|..||:|.||::.|||.||:||||..:|:.||||.:||
BPUM_0239___y 51 KGHRVCFICQNHHHFSTIMLAAIKAGAVAVPLSWQLTSFELEGILKKAEP 100
BSNT_00730___ 101 KAMFYGAEFKEILDEVLPELSSLCVTMETGTAYETSAEFEALFAGPDHLP 150
||:|:..||::|:..|...|.. |:.:|:|...:|:..||.:.|..|...
BPUM_0239___y 101 KALFFDREFRDIIAAVNVSLED-CLMVESGVNAKTTQLFEDILASNDGSK 149
BSNT_00730___ 151 ETEMVSPDDTALLMFTSGTTGNPKRCMITHGGIYRYVKKSNSSIARMKGL 200
....||.:|.|:::||||||||||.||:.||.||:::.:..:....:||.
BPUM_0239___y 150 LAVEVSEEDLAMILFTSGTTGNPKGCMVGHGRIYQFLTRRGNRGFDLKGK 199
BSNT_00730___ 201 RFLACHPIYHTSALICIMLGTFAETTFVFTKDQDPVHMLKVIEEEKIQTV 250
|:||.||:||.|::..::.......|.||..|..|..:|:.||:|:|..:
BPUM_0239___y 200 RYLASHPLYHMSSINHLIAAAIEGYTLVFLHDATPKRILETIEKERITFM 249
BSNT_00730___ 251 MALPVFYTYLLEAWETHQTDLSSLVILMTGGTKVPSSLIRRYLDIGIPLA 300
||.|..|||:||..:....||||..|.::||||||..||:.|.::||.:.
BPUM_0239___y 250 MAFPSAYTYMLEEMKRGSYDLSSFEIAISGGTKVPVRLIKDYKEVGIQMM 299
BSNT_00730___ 301 HGYGSTEAWGISTWTPDMGMDKAASAGKPVAGVKVKVEDPLTGEELPQGE 350
|||||||||.:|.|.|.||.||..||||....|:||:..|.|.|.||.||
BPUM_0239___y 300 HGYGSTEAWVVSAWHPAMGEDKMGSAGKVDPDVEVKIVHPETDETLPAGE 349
BSNT_00730___ 351 IGEIVVHTPFLFKGYEDNPEATAKVLQNGWFRTGDSGYVDEDGFIFITGR 400
|||:|:.:||.|.||...|:||.|||::|||..||:||:|||||:|||||
BPUM_0239___y 350 IGEVVMRSPFYFLGYYHQPDATEKVLKDGWFHMGDAGYLDEDGFLFITGR 399
BSNT_00730___ 401 YKDVIIYGGDNVYPDQVEEVIQQIPGILETAVVGIPDPLYGEKPKAFIVK 450
|||||:|||||:|||||||||.||||::|:||:|:||.||||.|.|:|||
BPUM_0239___y 400 YKDVILYGGDNIYPDQVEEVIDQIPGVIESAVIGVPDELYGEVPSAYIVK 449
BSNT_00730___ 451 NGGQRITEEDVIAFCKERLSAYKIPEVEFVNELPKNNLGKVKKDVLRNQA 500
:......||||:.:|:|||:.||:|.:.|..|||||.|||:.|..||...
BPUM_0239___y 450 DDSVDFCEEDVVNYCQERLADYKVPSIHFTQELPKNKLGKIMKKDLRELV 499
BSNT_00730___ 501 VHS 503
|::
BPUM_0239___y 500 VNA 502
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