Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_00655 and BPUM_0343

See DNA alignment / Visit BSNT_00655 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:26
# Commandline: needle
#    -asequence pep-align/BSNT_00655___yclF.1.24716.seq
#    -bsequence pep-align/BPUM_0343.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00655___yclF-BPUM_0343.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00655___yclF-BPUM_0343.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00655___yclF
# 2: BPUM_0343
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 498
# Identity:     345/498 (69.3%)
# Similarity:   423/498 (84.9%)
# Gaps:           7/498 ( 1.4%)
# Score: 1855.5
# 
#
#=======================================

BSNT_00655___      1 MASIDNESIIKSVPQKGFFGHPRGLFTLFFTEFWERFSYYGMRAILLYYL     50
                     |::||::.|:||||||||||||:||:||||||||||||||||||:|:||:
BPUM_0343          1 MSTIDHDKIVKSVPQKGFFGHPKGLYTLFFTEFWERFSYYGMRALLIYYM     50

BSNT_00655___     51 YTETVNGGLGFDKGTAVAIMSIYGSLVYMSTIIGGWLADRVFGTANTVFY    100
                     |||...||||||:.||.:|||:||:|||||.||||||||||||:::||||
BPUM_0343         51 YTEVTKGGLGFDQTTANSIMSVYGALVYMSGIIGGWLADRVFGSSSTVFY    100

BSNT_00655___    101 GGIFIMFGHIALAYPGSAIAFYISMALIIVGTGLLKPNVSSVVGDLYTKE    150
                     ||:|||.||:.||.|..|.|.:|||.|||:||||||||||::|||||:|.
BPUM_0343        101 GGVFIMLGHVILALPSGATALFISMGLIIIGTGLLKPNVSNIVGDLYSKT    150

BSNT_00655___    151 DPRRDSGFSIFYMGINLGGLLAPLIIGTLGQKYNYHLGFGAAAVGMLLGL    200
                     ||||||||||||||||:||.:||||:||||||.|:||||..||||||:||
BPUM_0343        151 DPRRDSGFSIFYMGINMGGFIAPLIVGTLGQKVNFHLGFSLAAVGMLVGL    200

BSNT_00655___    201 IVFALTRKKNLGLAGSNVPNPLS---KKS--AIGTGIGVIIVAIAVMISV    245
                     |.|.:|:|.||||||:.|.||||   :|:  ..||.| .|::|:..:|.:
BPUM_0343        201 ITFVITKKPNLGLAGTYVTNPLSATERKNFKIFGTLI-TIVLAVFAVIGI    249

BSNT_00655___    246 QTGVLTINRFIDLVSILGILIPVIYFIIMFTSKKADKTEKSRLAAYVPLF    295
                     |||.||||.|...||.||:|||::|||:|:.|||....|:||:.||:|||
BPUM_0343        250 QTGALTINLFTWFVSALGVLIPIVYFIVMYFSKKTSPVEQSRVLAYIPLF    299

BSNT_00655___    296 ISAVMFWAIQEQGATILAVYADERIKLSLGGFELQSSWFQSLNPLFVVIF    345
                     ::|||||||||||:.|||.|||:|..|:..|..|.|||||||||:|:|:.
BPUM_0343        300 LAAVMFWAIQEQGSNILATYADQRTNLNFLGMTLASSWFQSLNPIFIVLL    349

BSNT_00655___    346 APIFAWLWMKLGKRQPSTPVKFSIGIILAGLSFIIMVFPA-MQGKEALVS    394
                     :|:|||||::|||:|||||:|||:|::.||||||||:.|| |.|...|||
BPUM_0343        350 SPVFAWLWIRLGKKQPSTPIKFSLGLLFAGLSFIIMIIPAYMSGPNTLVS    399

BSNT_00655___    395 PLWLVLSFLLVVLGELCLSPVGLSVTTKLAPAAFSAQTMSMWFLTNAAAQ    444
                     ||||||||.|||:|||||||||||.|||||||||||||||:|||:||.||
BPUM_0343        400 PLWLVLSFFLVVIGELCLSPVGLSATTKLAPAAFSAQTMSLWFLSNAMAQ    449

BSNT_00655___    445 AINAQVAGLFDKIPETMYFGTIGLISIVLGGILLLLSPMIKRAMKGVL    492
                     ||||||..||||:|||:|||.|||::|||.|::|||:|:||:||||:.
BPUM_0343        450 AINAQVVKLFDKVPETVYFGIIGLLAIVLCGVMLLLTPVIKKAMKGIH    497


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.