Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00719 and BPUM_0386
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:29
# Commandline: needle
# -asequence pep-align/BSNT_00719___ycsK.1.24716.seq
# -bsequence pep-align/BPUM_0386___lipC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00719___ycsK-BPUM_0386___lipC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00719___ycsK-BPUM_0386___lipC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00719___ycsK
# 2: BPUM_0386___lipC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 213
# Identity: 94/213 (44.1%)
# Similarity: 135/213 (63.4%)
# Gaps: 3/213 ( 1.4%)
# Score: 508.0
#
#
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BSNT_00719___ 1 MMLRYTALGDSLTTGRGSGLFSPGFVQRFGDMMEADLKTRTAINIFARSG 50
|...|.|:|||||.|.|:.||..||.:|:..|:|........:::||:||
BPUM_0386___l 1 MGRSYVAIGDSLTVGVGARLFGGGFAERYQWMLEKKTHAPVELSVFAKSG 50
BSNT_00719___ 51 LNTEEILGLLSYPYVQKCIRDADMITITGCGNDLIDSVLAYQTSKDETIF 100
|.|::||.|.....|::.|..|::||||||||||:.::..|:..:|||..
BPUM_0386___l 51 LTTDQILQLFKRSNVRRAIAAANIITITGCGNDLVQAIQQYEKGEDETKL 100
BSNT_00719___ 101 SRVSAHCHENFEKMIAKVAEIKGENPSPYAIRVFNLYNPFPEIDIAGKWI 150
.:.:.||..||.|||.::|:||......|.:.:.|||||||:|.|||:|:
BPUM_0386___l 101 LQATLHCQANFSKMIQEIAQIKRGQKQSYCVYLMNLYNPFPQIPIAGRWL 150
BSNT_00719___ 151 TSFNSHLETLASAPHVKIADAYSIFKGKEQEYLSFDGVHPNSKGYQAMAE 200
..:|..|.:||:.|||::.|.|..|:|.|.||||.|..|||.|||:|||:
BPUM_0386___l 151 QQYNHQLRSLAANPHVEVVDVYRAFEGHEHEYLSIDQFHPNHKGYEAMAK 200
BSNT_00719___ 201 AVHKLGYKELSVS 213
.:.:...|:|
BPUM_0386___l 201 ILFQQSCKQL--- 210
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