Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05020 and BPUM_0408

See DNA alignment / Visit BSNT_05020 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:44
# Commandline: needle
#    -asequence pep-align/BSNT_05020___yqcG.1.24716.seq
#    -bsequence pep-align/BPUM_0408___yqcG.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05020___yqcG-BPUM_0408___yqcG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05020___yqcG-BPUM_0408___yqcG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05020___yqcG
# 2: BPUM_0408___yqcG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 553
# Identity:     236/553 (42.7%)
# Similarity:   336/553 (60.8%)
# Gaps:          62/553 (11.2%)
# Score: 1093.5
# 
#
#=======================================

BSNT_05020___      1 MKVFEAKTLLSEAENRAKEYKDLKSKMIKLKKAFKAVADLDDSEFSGKGA     50
                                 .:.|:|.|::|:.:|:.||||.:.||:|.| :|:||||
BPUM_0408___y      1 ------------MDARSKHYQELREQMVDLKKALQGVANLGD-DFTGKGA     37

BSNT_05020___     51 NNIKSFYEDQAGIADQWIDLIEMKISFLTSIPGILEDSSL-SDAYIEESF     99
                     :||||||::.||..|.:|..|:.:.:|...:.|.|:|::. .|.::||.|
BPUM_0408___y     38 DNIKSFYKELAGNVDMFISFIDKQKAFHEGVSGTLDDTNFGGDTFVEEHF     87

BSNT_05020___    100 LEHELANANSKSKSIMSEQKKAIKDILNEIHDVLPLDVFSTEDFKTELSS    149
                     |::.:......:|||:.:||||:|.|..:|.|:|.|:||.::.|..:::.
BPUM_0408___y     88 LDNAVHMGIKNAKSIVKDQKKALKTIFQDIDDLLSLEVFDSQTFDEKIAD    137

BSNT_05020___    150 AEKKRKNTVEKISEVDEDLTSEYALSEANEQMIQADYQALINATAKGKSA    199
                     ||.:||.||:.:.|:|::|..||||||..:|...|.|..::|||..||:.
BPUM_0408___y    138 AEDERKKTVKDLRELDQNLKDEYALSETEQQATMALYAEMMNATNDGKAI    187

BSNT_05020___    200 SPIHYNAKAYRDSEIHKMTEDVKKQSTDYIAFKDQQAEQRRLAKEQEELA    249
                     ||::::.|||::|||:|...|::||:::|:..|.:|.|.|.:|||||.||
BPUM_0408___y    188 SPMNFDKKAYQNSEIYKAKSDIEKQTSEYLNIKKEQQEAREIAKEQEALA    237

BSNT_05020___    250 NRPWYEKTWDVVCNFTGEVSGYYDYKRAADGVDPVTGEKLTEGQRVAAGA    299
                     |||||||..|...|...|::|..|.||||.||||:|||:||.|||||||.
BPUM_0408___y    238 NRPWYEKALDYGGNIVNELTGVNDAKRAATGVDPITGEELTAGQRVAAGG    287

BSNT_05020___    300 MAAAGYVPIVGWAGKLAKGGKAVYSTSKALYTADKALDVYKTPQ-TFHAL    348
                     ||||||:|||||||::.|||||||.|::|...|.||:|:|||.| :|.||
BPUM_0408___y    288 MAAAGYIPIVGWAGRIFKGGKAVYKTTQATSAAVKAVDIYKTSQKSFDAL    337

BSNT_05020___    349 QNSSKGLYGLASANGFSEAITGRDMFGNKISKEQQHNSINAALAVFMPFG    398
                     :.|.||||||.:.||||||||||||||||||||||..|:||||.:.:|||
BPUM_0408___y    338 KTSQKGLYGLTATNGFSEAITGRDMFGNKISKEQQEASMNAALGMLLPFG    387

BSNT_05020___    399 AKGFSGKTGLKASSSTETVTQVTVSRKGAFKEAKRD--------------    434
                     ||||.||.|:|   :|..:....:....|....|.|              
BPUM_0408___y    388 AKGFHGKMGVK---NTRELKHPVLENPRAGSALKDDFYHSFNDIIDNYAV    434

BSNT_05020___    435 ----AGIP-RAQQPESINRVEMRTAPHEGGRVIKDKNGKIIRTREYTFTN    479
                         ..:| |....:|:.::|        |.|:|      ..|:.....|
BPUM_0408___y    435 HSKRFDLPNRKGHMDSLYQIE--------GSVVK------YETKYVKVKN    470

BSNT_05020___    480 NKGEKIIIQDHSAGHEKGGQGPHFNVRPIDNTRTGK--VPGTKEHYPFNK    527
                     |..|.:..::...|..:      :.|.|..||.|.:  :||.|.....|:
BPUM_0408___y    471 NAPEMVQSKEIKNGVFE------WVVDPTTNTVTHRTFIPGGKVTGKINQ    514

BSNT_05020___    527 ---    527
                        
BPUM_0408___y    515 WER    517


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_05020 and BPUM_0408

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
