Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00021 and BPUM_0503

See DNA alignment / Visit BSNT_00021 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:57
# Commandline: needle
#    -asequence pep-align/BSNT_00021___yaaC.1.24716.seq
#    -bsequence pep-align/BPUM_0503___yaaC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00021___yaaC-BPUM_0503___yaaC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00021___yaaC-BPUM_0503___yaaC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00021___yaaC
# 2: BPUM_0503___yaaC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 324
# Identity:     173/324 (53.4%)
# Similarity:   228/324 (70.4%)
# Gaps:          11/324 ( 3.4%)
# Score: 920.0
# 
#
#=======================================

BSNT_00021___      1 MTYHEWKDLALFYSVESTQKFLEKVYILNGIDDAKKNSFKNSERFIYFLK     50
                     |....||||..|||:|::||||.:.|....|.||.:.::||.||||||||
BPUM_0503___y      1 MKSSGWKDLKRFYSLETSQKFLYQQYEKRSIQDANQQAYKNCERFIYFLK     50

BSNT_00021___     51 HAESFYKQAAYSPLEIKPILLFYGMAQLIKACLITRDPHYPSHTSVLAHG    100
                     |..:||:|||.:|||:||||||||||||:||||:|.||:|||.|||||||
BPUM_0503___y     51 HGHTFYEQAAIAPLELKPILLFYGMAQLLKACLLTVDPYYPSQTSVLAHG    100

BSNT_00021___    101 VTTRKRKKQNYCFSDDEVKIQRNGLCVHFMKHLFGQSDIVDERYTMKKLL    150
                     ||:||||||:|.||.|||||||||||:|.:||||..:.:.|||:||..||
BPUM_0503___y    101 VTSRKRKKQHYRFSKDEVKIQRNGLCMHVLKHLFHLNGLEDERFTMIHLL    150

BSNT_00021___    151 MAIPELSDIFYFQQKERFMTKVEKDKNEIFVPEEVVINYKMSDSRFAEYM    200
                     ..|||:|.|..||::...:.||||| |.:.:.:.:.:.|.||..||.||.
BPUM_0503___y    151 SKIPEMSHILEFQKQPSTLVKVEKD-NGMMIQDHIPLLYNMSAERFIEYF    199

BSNT_00021___    201 SHHYQWSFTKKNEHGLLFEISPQDKEPWTSTSLLFDMEKNQYYIPSQREQ    250
                     ..|..|...::....|.|::| .::.|..:|.|.:|:|.||:||||.|:.
BPUM_0503___y    200 EFHTSWKLKQREAKKLAFDVS-LEENPAFATHLHYDLEANQWYIPSTRDS    248

BSNT_00021___    251 FLRLPEMTIHYLILYNVGMIARYETEWWYELLTQHISDDYVLIQQFLLVT    300
                     ||.:||:..|||::||:.||||||||||||||:|:||||||:|::::.:.
BPUM_0503___y    249 FLGIPEIISHYLLMYNLSMIARYETEWWYELLSQYISDDYVMIERYMEIA    298

BSNT_00021___    301 EKKFPKYASQFLLHF---------    315
                     |:|||.|....|...         
BPUM_0503___y    299 EEKFPAYIMMLLEEKTKKTSSKWN    322


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