Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01037 and BPUM_0526

See DNA alignment / Visit BSNT_01037 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:40
# Commandline: needle
#    -asequence pep-align/BSNT_01037___ydiF.1.24716.seq
#    -bsequence pep-align/BPUM_0526___ydiF.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01037___ydiF-BPUM_0526___ydiF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01037___ydiF-BPUM_0526___ydiF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01037___ydiF
# 2: BPUM_0526___ydiF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 642
# Identity:     483/642 (75.2%)
# Similarity:   558/642 (86.9%)
# Gaps:           2/642 ( 0.3%)
# Score: 2524.0
# 
#
#=======================================

BSNT_01037___      1 MMILQINQLSKSFGADTILNNIKLEVRNRDRIAIVGRNGAGKSTLLKIIA     50
                     |||||:|||||||||||:|.||||||:.||||||||||||||||||||||
BPUM_0526___y      1 MMILQVNQLSKSFGADTVLTNIKLEVKARDRIAIVGRNGAGKSTLLKIIA     50

BSNT_01037___     51 GQLSYEKGEIIKPKDITMGYLAQHTGLDSKLTIKEELLTVFDHLKAMEKE    100
                     ||||||:||||||||:::|||||||.:.|..|:|:|||:||||||.||:|
BPUM_0526___y     51 GQLSYEQGEIIKPKDLSIGYLAQHTDVTSTRTLKDELLSVFDHLKKMEQE    100

BSNT_01037___    101 MRAMEEKMAAAAPGELESIMKTYDRLQQEFKDKGGYQYEADVRSVLHGLG    150
                     ||.:|||||::...||:|:|||||||||||||:|||||||||||:|||||
BPUM_0526___y    101 MRTIEEKMASSTGAELDSLMKTYDRLQQEFKDQGGYQYEADVRSILHGLG    150

BSNT_01037___    151 FSHFDDSTQVQSLSGGQKTRLALGKLLLTQPDLLILDEPTNHLDIDTLTW    200
                     ||||::.|.|||||||||||||||||||.:|.||||||||||||||||:|
BPUM_0526___y    151 FSHFENETTVQSLSGGQKTRLALGKLLLMKPQLLILDEPTNHLDIDTLSW    200

BSNT_01037___    201 LEHFLQGYSGAILIVSHDRYFLDKVVNQVYEVSRAESKKYHGNYSAYLDQ    250
                     ||.:||.|:||||||||||||||||||.||||||...||:.||||.|||.
BPUM_0526___y    201 LEQYLQNYTGAILIVSHDRYFLDKVVNHVYEVSRTAMKKFAGNYSKYLDL    250

BSNT_01037___    251 KAAQYEKDLKMYEKQQDEIAKLQDFVDRNLARASTTKRAQSRRKQLERME    300
                     ||.|.|:|:|:|||||:||:|||||||||||||||||||||||||||||:
BPUM_0526___y    251 KAEQLERDMKLYEKQQEEISKLQDFVDRNLARASTTKRAQSRRKQLERMD    300

BSNT_01037___    301 VMSKPLGDEKSANFHFDITKQSGNEVLRVHDLTISYENQPPLLTEVSFML    350
                     .:.||||||||||||||||:||||:||:||||.|.|:.:.|||:.:||.:
BPUM_0526___y    301 RLDKPLGDEKSANFHFDITRQSGNDVLKVHDLDIRYDEKIPLLSSLSFQI    350

BSNT_01037___    351 TRGESAALVGPNGIGKSTLLKTLIDTLKPDQGTISYGSNVSVGYYDQEQA    400
                     .|.:|.||:||||||||||||||.:||||.:|.|::||:|::||||||||
BPUM_0526___y    351 KREDSVALIGPNGIGKSTLLKTLTNTLKPAKGDITFGSHVTIGYYDQEQA    400

BSNT_01037___    401 ELTSSKRVLDELWDEYPGLPEKEIRTCLGNFLFSGDDVLKPVHSLSGGEK    450
                     :|||||:||:||||:||.:.||:||||||||||||||||||||:||||||
BPUM_0526___y    401 KLTSSKKVLNELWDDYPHMNEKDIRTCLGNFLFSGDDVLKPVHALSGGEK    450

BSNT_01037___    451 ARLALAKLMLQKANFLILDEPTNHLDLDSKEVLENALIDYPGTLLFVSHD    500
                     |||||||||||||||||||||||||||||||:|||||||||||:||||||
BPUM_0526___y    451 ARLALAKLMLQKANFLILDEPTNHLDLDSKEILENALIDYPGTILFVSHD    500

BSNT_01037___    501 RYFINRIATRVLELSSSHIEEYLGDYDYYTEKKTEQLELEKINQQEETEK    550
                     ||||||:||:|.|||.:...|||||||||.|||.||||||.|.:.|..:|
BPUM_0526___y    501 RYFINRLATKVFELSPTETREYLGDYDYYLEKKDEQLELEAIQENEALKK    550

BSNT_01037___    551 TPATVKSDSKRSYEEEKEWKKKERQRLRRIEEIETTVQTIEENISRNDEL    600
                     ..|.....:|.||.||||.||||||:.|||||||..:..||..:..|:||
BPUM_0526___y    551 QAAKPVETAKLSYAEEKELKKKERQKQRRIEEIEERIAIIEAKLGDNEEL    600

BSNT_01037___    601 LCDPEVYQDHEKVQAIHADNEKLNQELESLLSEWEELSTEED    642
                     ||||.::|||||||.|..:|:..:||||||.:||||||..  
BPUM_0526___y    601 LCDPAIFQDHEKVQNIQIENDTFHQELESLFAEWEELSES--    640


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