Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05085 and BPUM_0549
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:45
# Commandline: needle
# -asequence pep-align/BSNT_05085.1.24716.seq
# -bsequence pep-align/BPUM_0549___yopK.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05085-BPUM_0549___yopK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05085-BPUM_0549___yopK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05085
# 2: BPUM_0549___yopK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 378
# Identity: 134/378 (35.4%)
# Similarity: 215/378 (56.9%)
# Gaps: 18/378 ( 4.8%)
# Score: 579.5
#
#
#=======================================
BSNT_05085 1 MNTVATRDIRGHLRELIKSSGEKQITVAANIGISEGYLSKFFNGK-EINF 49
|.:| |:|..|::||..:...|..:|..:|.|.||:|||.|.| ||.|
BPUM_0549___y 1 MKSV---DVRDQLKKLIDINPLSQNEIAKKLGFSSGYISKFINKKQEIAF 47
BSNT_05085 50 WMVRNIVLYLDSENETELMRRYCLDGVKK-KNYPAALEYCYAKRLFSVVE 98
|||..::::||.:||.|||:.: :|.:|: :|..|:|||.::|....:.:
BPUM_0549___y 48 WMVYELIIFLDCDNEKELMKGF-IDIIKRNENIRASLEYSHSKSYRELTD 96
BSNT_05085 99 TLIDRQIEKDGKLN-SWSKIYKFILENR--LSLGSLEYTQRLNELKSDCH 145
.||.|......|.| .|..||::.|::: :......|.:.|.:|.....
BPUM_0549___y 97 ILIQRCFLVGNKENEEWGLIYQWQLQSKRMVYYDEESYLKNLKKLTPKTL 146
BSNT_05085 146 DTKTLLLILEMYANFQSRKYELTLDKIKKIKKLISRISDPFLKLAFSARL 195
:.||||||||||.:|..::|||....::.|..||.:|.|||::.:|..||
BPUM_0549___y 147 EMKTLLLILEMYCHFFKKRYELAAYYVRNINDLILKIQDPFIRKSFKCRL 196
BSNT_05085 196 EEVSVNIYLKQDNAVYKAREAAHSLHEKNLSVNLNLTALYILALSYMNES 245
.|.|..||||:||.:..||:.|..|.|:||..|..:|..::..||:..||
BPUM_0549___y 197 NEASAYIYLKKDNDILNARKIADDLIEENLGPNYLITGYFVKGLSFFLES 246
BSNT_05085 246 YFVSYEYYKKCIKLLDQFPDRIKELTQNKEEIAILQRYWGKEISTEYQVT 295
|.|:...::|.|::..:. .|.....:..|::.:||.:|.|.::|| :.:
BPUM_0549___y 247 YEVASYCFEKVIEISKKI-GRNSTFEETCEQLGLLQIFWEKPLNTE-KNS 294
BSNT_05085 296 TFAKALATQDSLSSYYEHDFYKRYALLFDGIKEESAEKLLLSLSFFSQQK 345
.|.:||.:...:..:.....|....|||:|.::::.|||||::.:|..||
BPUM_0549___y 295 CFIRALGSLKKIDQFNSESKYVPLILLFEGKRKQNKEKLLLAMHYFYTQK 344
BSNT_05085 346 DQFRSTLPKIYLIKLGFNFNI------- 366
|.||:::|:..|..||..|||
BPUM_0549___y 345 DNFRASIPRYLLEGLGVQFNINEGGEYV 372
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