Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_05082 and BPUM_0550

See DNA alignment / Visit BSNT_05082 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:45
# Commandline: needle
#    -asequence pep-align/BSNT_05082.1.24716.seq
#    -bsequence pep-align/BPUM_0550.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05082-BPUM_0550.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05082-BPUM_0550.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05082
# 2: BPUM_0550
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 134
# Identity:      46/134 (34.3%)
# Similarity:    87/134 (64.9%)
# Gaps:           8/134 ( 6.0%)
# Score: 227.5
# 
#
#=======================================

BSNT_05082         1 MESKKIGHAVKRLRTEKKKTVDEAAKEIGISQSYLSRIENNTQVPSLKVI     50
                      ....:|..:|:||.:||.|....|:.:||:.||||::|.. |.||:.::
BPUM_0550          1 -MDNLVGQKIKKLRKQKKYTQKYVAENLGITDSYLSKLEKG-QPPSITLL     48

BSNT_05082        51 EKIADYFNVHKSYLFFDEESLDSFTDPEKKLLAQKSITVDDLK-KLNIVH     99
                     :|:||:|:|.:||.|..::.|.:|.:.||:|:.:|.::::::| |.||:.
BPUM_0550         49 KKMADFFDVDQSYFFIKDDELKNFNETEKELIFEKDLSLENIKNKFNILK     98

BSNT_05082       100 ENGSKITEEELQIVIQHLKELRKLKESYMNDKD-    132
                     .:..:|:::||:::::.||..|..|    ||.| 
BPUM_0550         99 VDDQEISDDELKLMLEVLKAYRVSK----NDIDS    128


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.