Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01977 and BPUM_1116

See DNA alignment / Visit BSNT_01977 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:30
# Commandline: needle
#    -asequence pep-align/BSNT_01977___yjcF.1.24716.seq
#    -bsequence pep-align/BPUM_1116___yjcF.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01977___yjcF-BPUM_1116___yjcF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01977___yjcF-BPUM_1116___yjcF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01977___yjcF
# 2: BPUM_1116___yjcF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 145
# Identity:      74/145 (51.0%)
# Similarity:   100/145 (69.0%)
# Gaps:           6/145 ( 4.1%)
# Score: 342.0
# 
#
#=======================================

BSNT_01977___      1 MKAVIAKNEEQLKDAFYVREEVFVKEQNVPAEEEIDELENESEHIVVYDG     50
                     ||.|||..:.|.:||:|||:|||||||.||.|.||||||:|:.|.|:|:.
BPUM_1116___y      1 MKTVIATAQTQREDAYYVRKEVFVKEQEVPLEIEIDELEDEAIHFVIYND     50

BSNT_01977___     51 E-KPVGAGRWRMKDG-YGKLERICVLKSHRSAGVGGIIMKALEKAAADGG     98
                     | ||..|.|.|:.:| ..|||||||||..|:.|:|..:::|||..|...|
BPUM_1116___y     51 EMKPQAAARLRIIEGPKAKLERICVLKEARAFGLGHKLLEALETEAIANG    100

BSNT_01977___     99 ASGFILNAQTQAVPFYKKHGYRVLSEKEYLDAGIPHLQMMKD---    140
                     |...:::||.||:|||:|.||:.:|| .:.:|||.|::|.|.   
BPUM_1116___y    101 AKEAVMHAQVQALPFYEKKGYKAISE-PFEEAGITHVKMTKTLSV    144


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