Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02428 and BPUM_1354
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:54
# Commandline: needle
# -asequence pep-align/BSNT_02428.1.24716.seq
# -bsequence pep-align/BPUM_1354___ykyA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02428-BPUM_1354___ykyA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02428-BPUM_1354___ykyA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02428
# 2: BPUM_1354___ykyA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 222
# Identity: 63/222 (28.4%)
# Similarity: 90/222 (40.5%)
# Gaps: 79/222 (35.6%)
# Score: 301.0
#
#
#=======================================
BSNT_02428 0 -------------------------------------------------- 0
BPUM_1354___y 1 MKQIRRSMKAGAALAGICTLLLTGCGGQSSFHDMQEAMTKMSEKEASFEK 50
BSNT_02428 1 -----------------------------MLLYLIKALENVSKREEHLKL 21
:.....:||.:.:|||||||.
BPUM_1354___y 51 EQGTLQSYEKKEQQLYKKMIQTTKNHTKTVSSLSDQALASAAKREEHLKT 100
BSNT_02428 22 ENDSMKKSETEFEEAKTSAEHIKEKDIKEKADAAANHMEKRYTSYGTMYK 71
|.|||.:|:.|.:..|.|||.|::.|:|||||.....:||||.||..:||
BPUM_1354___y 101 EKDSMDESKKELKTVKESAERIQDTDLKEKADETVKSLEKRYASYDQLYK 150
BSNT_02428 72 EYKKALELNKKLYMQLKDKDLTRDDLDQQIDKVNASYEKILKYSGEFNEQ 121
||:|||:.::.||..||.|||...:|..::..||.||.|:.|...:||:.
BPUM_1354___y 151 EYQKALKQDQHLYQSLKKKDLGYKELKSKLKTVNRSYSKVRKEGKKFNQY 200
BSNT_02428 122 TEKYNKAREDLYDAAGYRVKKS 143
|::.|:.::.|..||....|||
BPUM_1354___y 201 TKQLNEHKQALSKAADQESKKS 222
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