Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02684 and BPUM_1547
See
DNA alignment /
Visit
BSNT_02684 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:17
# Commandline: needle
# -asequence pep-align/BSNT_02684___ylxL.1.24716.seq
# -bsequence pep-align/BPUM_1547___ylxL.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02684___ylxL-BPUM_1547___ylxL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02684___ylxL-BPUM_1547___ylxL.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02684___ylxL
# 2: BPUM_1547___ylxL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 192
# Identity: 86/192 (44.8%)
# Similarity: 124/192 (64.6%)
# Gaps: 35/192 (18.2%)
# Score: 389.0
#
#
#=======================================
BSNT_02684___ 1 MKNMSTLLWLLSFTLHGVLLYAVIILYTRLAAVKETEKQQKQILEETENT 50
:|||:||.||..|:|.|||||||:.::|.||::|:::|||||||
BPUM_1547___y 1 ------MLWLISFMLHAALIYFVIILYTRMNSLKATEQKQRELLEETENT 44
BSNT_02684___ 51 LAAFLLELKEENEKLIENKASSASQSDEESQKSGLQTSETYQERDPVQ-- 98
|||||:|:||||:||.:..|:|...|.|| .||..||.: |.:.|::
BPUM_1547___y 45 LAAFLMEVKEENDKLSKVAAASPDFSAEE-LKSDFQTPK--QPQTPIESQ 91
BSNT_02684___ 99 ---EAEN-LPEHIEGLITEVDRREELVNSEV----------------QSF 128
|:|: :|||:..|::||:.:||.||..| ::|
BPUM_1547___y 92 QSVESEDPVPEHLSALLSEVEVQEEKVNEPVPHLESEASVPSESEIEETF 141
BSNT_02684___ 129 EDQVIELYEQGYSASQIAQKMKSGKTEIELFLKFRSKGVKDS 170
||||..||::|:|..:||:::|:|||||||.|||..|.
BPUM_1547___y 142 EDQVKTLYDKGHSLEEIAKELKTGKTEIELLLKFSGKL---- 179
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.