Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02792 and BPUM_1628

See DNA alignment / Visit BSNT_02792 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:26
# Commandline: needle
#    -asequence pep-align/BSNT_02792___nrdI.1.24716.seq
#    -bsequence pep-align/BPUM_1628___nrdI.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02792___nrdI-BPUM_1628___nrdI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02792___nrdI-BPUM_1628___nrdI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02792___nrdI
# 2: BPUM_1628___nrdI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 132
# Identity:      96/132 (72.7%)
# Similarity:   115/132 (87.1%)
# Gaps:           2/132 ( 1.5%)
# Score: 512.0
# 
#
#=======================================

BSNT_02792___      1 --MVQIIFDSKTGNVQRFVNKTGFQQIRKVDEMDHVDTPFVLVTYTTNFG     48
                       ::||:|||||||||||::||.|...:|:...:.:||||:|||:||.||
BPUM_1628___n      1 MELIQIVFDSKTGNVQRFLDKTPFTDKQKLTGEEFLDTPFILVTFTTGFG     50

BSNT_02792___     49 QVPASTQSFLEKYAHLLLGVAASGNKVWGDNFAKSADTISRQYQVPILHK     98
                     |||::|||||||.||||||||.||||||||||||||||||:||||||||.
BPUM_1628___n     51 QVPSTTQSFLEKNAHLLLGVAVSGNKVWGDNFAKSADTISKQYQVPILHT    100

BSNT_02792___     99 FELSGTSKDVELFTQEVERVVTKSSAKMDPVK    130
                     ||||||.:|||||||||||:||||.:|:|.:|
BPUM_1628___n    101 FELSGTKRDVELFTQEVERIVTKSGSKVDTIK    132


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