Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01159 and BPUM_1652
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:48
# Commandline: needle
# -asequence pep-align/BSNT_01159.1.24716.seq
# -bsequence pep-align/BPUM_1652.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01159-BPUM_1652.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01159-BPUM_1652.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01159
# 2: BPUM_1652
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 683
# Identity: 317/683 (46.4%)
# Similarity: 447/683 (65.4%)
# Gaps: 56/683 ( 8.2%)
# Score: 1587.5
#
#
#=======================================
BSNT_01159 1 MKVFEAKTLLSEAADRAKEYKELRTQMVNLRKALKSVADLSDSEFSGKGA 50
||:.:|.:|||....|:|.|:|||.:|.:::||||||:.|.| ||:||||
BPUM_1652 1 MKILDAPSLLSAIEQRSKVYQELRDEMQHVKKALKSVSGLGD-EFTGKGA 49
BSNT_01159 51 SNIKAFYHDHVGVTDQWIDYIDMKIAFFNSIAGAAEDKGL-SDAYIEESF 99
.||||||.|....||.::|:|||:.||.:.:.|..:|:.| ...:|:|.|
BPUM_1652 50 DNIKAFYEDLALYTDTYLDFIDMQKAFLDGVKGKLDDESLGGSTFIDEHF 99
BSNT_01159 100 LEHELANANKKSKSIMSEQKKAMKDILNDIDDILPLDLFSTETFKDELAD 149
|:.:|....:.:|.::.|||:|:..|.:||.|::.|::||::...:.|.|
BPUM_1652 100 LDAQLKQGIQNNKDMVKEQKEALSTIFDDISDLIELNVFSSKEVNEHLDD 149
BSNT_01159 150 ANDKRKKTLDKLDALDEDLKTEYALSEPNEQFIKSDFQKLQEATGKGKNA 199
||.|||..::.|..:|.:||||||.||..|:.:.:.:.|:..||||||||
BPUM_1652 150 ANKKRKDAIEALHKIDHELKTEYAKSEAIEKHLATFYAKMMAATGKGKNA 199
BSNT_01159 200 TPIHYNAKAYRDSDIHKKKGDIEKRTEAYLKIKTEEAKKREIEKLKERLK 249
.|::|:|||:.::|::|....|:.:.:||||:|.||.:||.|::|||:|.
BPUM_1652 200 QPMYYDAKAFHETDVYKNHDKIDAQVKAYLKVKKEEKEKRRIKELKEKLN 249
BSNT_01159 250 NYDYADADEFYSMAKTIGYENLTAEQQRYFT---QIENTRELEAGF---- 292
:......::::.:...||||||:.:|:.|:: ||::..|...||
BPUM_1652 250 DPSCISEEKYFEIVDEIGYENLSYDQKMYYSQLLQIKSQEEASEGFVDVV 299
BSNT_01159 293 KGVAVGLYDSGKDAVVGLWDMVTDPGGTVEAITGAMAHPIKTYEAISAAI 342
||.||||||..||.|||::|:||||||.||::..|::|||:|.:||..:|
BPUM_1652 300 KGAAVGLYDVAKDTVVGIYDLVTDPGGAVESVVTAVSHPIETSKAIGKSI 349
BSNT_01159 343 EESYQKDMVNGDTYSRARWVSYAVGTVVTSIVGTKGVGAVSKTG-TAAKV 391
.:|:||::::||.|||:.|.:||.|::...:.|:||.||::||| ||||.
BPUM_1652 350 SDSFQKEVIDGDAYSRSHWFAYATGSLAEIVFGSKGAGAITKTGTTAAKT 399
BSNT_01159 392 TAKVKTAANKSATAQKAIMVSKQTVDHIKQKVNTGIEVSKKHVKTRLNQI 441
|.| .|:|...| .:
BPUM_1652 400 TVK------------------------------KGLEQGSK-------SL 412
BSNT_01159 442 GDLTLADILPYHPRHDLVPAG---VPYNAVNGVTLKEGLQKFAKVI-LPK 487
..:::.::|||.|:..| || :|||..:|..||..|...||.: ...
BPUM_1652 413 DRVSIPNLLPYSPKFQL--AGGPKLPYNVFDGENLKNKLLSMAKRLDNNS 460
BSNT_01159 488 PYGTSSSGRRTPAPHVPPVTVKYGEHFARWSRKKVLKPNVIYKTKEGYTY 537
.||.|.:|||.|||..||..|.||:|:.||.|||||||||:|.||:||||
BPUM_1652 461 GYGISKTGRRLPAPKSPPTVVSYGDHYVRWKRKKVLKPNVVYSTKQGYTY 510
BSNT_01159 538 TTDNYGRITSVKA-DLQLGEAKRNQYAQTNAGKPQDRKPDDDGGHLIATQ 586
|||:||||..|:| ||:.||.|||||||:|:||| ||..||||||||||.
BPUM_1652 511 TTDHYGRIVKVQASDLKYGEVKRNQYAQSNSGKP-DRLLDDDGGHLIATI 559
BSNT_01159 587 FKGSGQFDNIVPMNSQINRSGGKWYNMEQVWSKALSQKPPKQVTVKINNI 636
|||||..||::||||||||||||||.|||.|..||.:.||::|:|.|..:
BPUM_1652 560 FKGSGDIDNLLPMNSQINRSGGKWYQMEQEWLSALKEVPPEKVSVYIEAV 609
BSNT_01159 637 YEGDSLRPSKFIVVYKVGDKEPVRTIIKNKAGG 669
|..||||||.|.|.||:|:.... ..|||:.||
BPUM_1652 610 YHSDSLRPSAFEVKYKIGESTDY-IYIKNEYGG 641
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