Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06100 and BPUM_1749
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:37
# Commandline: needle
# -asequence pep-align/BSNT_06100___mmsA.1.24716.seq
# -bsequence pep-align/BPUM_1749___mmsA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06100___mmsA-BPUM_1749___mmsA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06100___mmsA-BPUM_1749___mmsA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06100___mmsA
# 2: BPUM_1749___mmsA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 491
# Identity: 319/491 (65.0%)
# Similarity: 402/491 (81.9%)
# Gaps: 9/491 ( 1.8%)
# Score: 1731.5
#
#
#=======================================
BSNT_06100___ 1 --MAEIRKLKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDY 48
..:::.|||||.|:|:|::|.|.|.|.||||.:::.:||:|||:|::.
BPUM_1749___m 1 MTKTDVQMLKNYIGGQWIEAETSQTEAVYNPATGKIIAEVPLSTKKDVER 50
BSNT_06100___ 49 AAQTAAEAFETWSKVAVPRRARILFNFQQLLSQHKEELAHLITIENGKNT 98
|.|.|.|||.||||..|||||||||.:||||....:|||.|:|:||||:.
BPUM_1749___m 51 AVQAAQEAFTTWSKTPVPRRARILFKYQQLLVDKWDELAELVTMENGKSI 100
BSNT_06100___ 99 KEALGEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGG 148
.||.|||.||||.||||||||:||||..|..||:.:|:..|||||||:||
BPUM_1749___m 101 TEAKGEVQRGIECVEFAAGAPTLMMGKQLPDIASGLESGMYRYPIGVIGG 150
BSNT_06100___ 149 IAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLP 198
|.||||||||||||||:|||.||||:||||||||:|..:|.||||:||||
BPUM_1749___m 151 ITPFNFPMMVPCWMFPLAIACGNTFVLKPSERTPILAARLAELFEEAGLP 200
BSNT_06100___ 199 KGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSEHLKRVQ 248
|||.|:|.||||||||:|||.::||||||||:||.|||||||:||.||||
BPUM_1749___m 201 KGVLNIVNGAHDVVNGLLEHQKVKAISFVGSQPVAEYVYKKGTEHGKRVQ 250
BSNT_06100___ 249 SLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIAD 298
:|.|||||:|||.||:|:.....|:|||||||||||||.|||.|||.:||
BPUM_1749___m 251 ALAGAKNHSIVLKDADLDAATKQIIGAAFGSAGERCMAAAVVAVEEEVAD 300
BSNT_06100___ 299 EFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGAR 348
:.:.||.::..::.||||:::.|||||||||::|:|||.||:.|:||||.
BPUM_1749___m 301 DLIQKLVDESNELVIGNGINEEVFLGPVIREEHKERTLQYIQSGIEEGAS 350
BSNT_06100___ 349 LVCDGREN--VSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNL 396
|:.|||:: .:..||||||||||:||.:|.||:|||||||||::||.:|
BPUM_1749___m 351 LIRDGRKDHETNGKGYFVGPTIFDHVTNQMKIWQDEIFAPVLSIVRVSSL 400
BSNT_06100___ 397 KEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGVPAPMAF 446
.|||:::|:|:|||||||:|.::::||.|||||:|||||:|:||||||||
BPUM_1749___m 401 AEAIDLSNQSKFANGACLYTDSASSIREFRENIEAGMLGVNIGVPAPMAF 450
BSNT_06100___ 447 FPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTARFPAPDFN 487
|||||||.||:|.|||||.|.|:||||||:||||:.
BPUM_1749___m 451 FPFSGWKDSFYGDLHANGTDGVEFYTRKKMVTARYM----- 486
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