Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04410 and BPUM_1751
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:57
# Commandline: needle
# -asequence pep-align/BSNT_04410___amyC.1.24716.seq
# -bsequence pep-align/BPUM_1751___amyC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04410___amyC-BPUM_1751___amyC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04410___amyC-BPUM_1751___amyC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04410___amyC
# 2: BPUM_1751___amyC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 276
# Identity: 186/276 (67.4%)
# Similarity: 224/276 (81.2%)
# Gaps: 0/276 ( 0.0%)
# Score: 966.0
#
#
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BSNT_04410___ 1 MRAARTKSMRIITLLAAIVACAHFIPFYILLTTSLKAKGDYSSKWIFPAD 50
|.....:..|..|:||.:|...|.||||||||||.|..||:||||:||..
BPUM_1751___a 1 MENTFKRKKRWYTVLALLVTVLHLIPFYILLTTSFKGIGDFSSKWLFPKA 50
BSNT_04410___ 51 ISFHNFSEAWERASLGNSFINTMIITGFSALLLIIFGSLAAYPLARRETK 100
:...||..||..|.||.||:||:|||..||:.||..|||||||||||.||
BPUM_1751___a 51 LHLENFRTAWTEAQLGQSFLNTVIITFSSAVCLIFLGSLAAYPLARRSTK 100
BSNT_04410___ 101 LNKAVFALLISIMIIPPLTSMVPLYRMVVDAGMVNTHAIAIFINTAAYMP 150
|||||:.|.|:||:|||||::||||:|||..||:||:.|||..|.||::|
BPUM_1751___a 101 LNKAVYVLFIAIMVIPPLTALVPLYKMVVQIGMMNTYQIAILNNVAAFLP 150
BSNT_04410___ 151 LTVFLYSGFIRSTIPKELEEAARIDGAGMLKIFFTIVFPLLKPITATICI 200
||:|||:|||||||||||||||||||||.|::||||||||||||||::.|
BPUM_1751___a 151 LTIFLYAGFIRSTIPKELEEAARIDGAGTLRVFFTIVFPLLKPITASVLI 200
BSNT_04410___ 201 ISCVFIWNDYQFAIFFLQDQKVQTLTVAMAGFFGENANNLHLVAAAALMA 250
|:||:||||||||||||||:::.|||||::.|||:|.:.|.||.||||:|
BPUM_1751___a 201 IACVYIWNDYQFAIFFLQDKEMHTLTVALSHFFGQNQHQLQLVGAAALIA 250
BSNT_04410___ 251 MLPMVVLFLALQKYFIAGLSSGAVKG 276
|||||::||.||||||||||.|:|||
BPUM_1751___a 251 MLPMVMMFLLLQKYFIAGLSQGSVKG 276
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